Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Ccdc9Q8VC31 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Ccdc9Q8VC31 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC17.23■□□□□ 0.35
Ccdc9Q8VC31 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ccdc9Q8VC31 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ccdc9Q8VC31 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ccdc9Q8VC31 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ccdc9Q8VC31 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ccdc9Q8VC31 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ccdc9Q8VC31 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ccdc9Q8VC31 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC17.22■□□□□ 0.35
Ccdc9Q8VC31 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ccdc9Q8VC31 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ccdc9Q8VC31 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ccdc9Q8VC31 Gm13836-201ENSMUST00000121159 501 ntBASIC17.22■□□□□ 0.35
Ccdc9Q8VC31 Gm9013-201ENSMUST00000132939 882 ntBASIC17.22■□□□□ 0.35
Ccdc9Q8VC31 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC17.22■□□□□ 0.35
Ccdc9Q8VC31 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ccdc9Q8VC31 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ccdc9Q8VC31 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Ccdc9Q8VC31 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ccdc9Q8VC31 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ccdc9Q8VC31 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ccdc9Q8VC31 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ccdc9Q8VC31 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ccdc9Q8VC31 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC17.22■□□□□ 0.35
Ccdc9Q8VC31 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ccdc9Q8VC31 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ccdc9Q8VC31 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Ccdc9Q8VC31 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ccdc9Q8VC31 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Ccdc9Q8VC31 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ccdc9Q8VC31 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Ccdc9Q8VC31 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ccdc9Q8VC31 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ccdc9Q8VC31 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ccdc9Q8VC31 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Ccdc9Q8VC31 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ccdc9Q8VC31 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ccdc9Q8VC31 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Ccdc9Q8VC31 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ccdc9Q8VC31 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Ccdc9Q8VC31 AC127302.2-201ENSMUST00000215212 268 ntBASIC17.21■□□□□ 0.35
Ccdc9Q8VC31 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Ccdc9Q8VC31 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ccdc9Q8VC31 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ccdc9Q8VC31 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ccdc9Q8VC31 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ccdc9Q8VC31 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ccdc9Q8VC31 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Ccdc9Q8VC31 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Ccdc9Q8VC31 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
Ccdc9Q8VC31 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
Ccdc9Q8VC31 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.34
Ccdc9Q8VC31 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Ccdc9Q8VC31 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Ccdc9Q8VC31 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
Ccdc9Q8VC31 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Ccdc9Q8VC31 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Ccdc9Q8VC31 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ccdc9Q8VC31 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Ccdc9Q8VC31 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ccdc9Q8VC31 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ccdc9Q8VC31 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ccdc9Q8VC31 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ccdc9Q8VC31 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC17.2■□□□□ 0.34
Ccdc9Q8VC31 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC17.2■□□□□ 0.34
Ccdc9Q8VC31 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ccdc9Q8VC31 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Ccdc9Q8VC31 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ccdc9Q8VC31 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ccdc9Q8VC31 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ccdc9Q8VC31 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ccdc9Q8VC31 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ccdc9Q8VC31 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Ccdc9Q8VC31 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ccdc9Q8VC31 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ccdc9Q8VC31 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Ccdc9Q8VC31 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Ccdc9Q8VC31 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Ccdc9Q8VC31 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Ccdc9Q8VC31 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ccdc9Q8VC31 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
Ccdc9Q8VC31 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Ccdc9Q8VC31 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Ccdc9Q8VC31 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ccdc9Q8VC31 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
Ccdc9Q8VC31 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ccdc9Q8VC31 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ccdc9Q8VC31 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Ccdc9Q8VC31 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ccdc9Q8VC31 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ccdc9Q8VC31 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Ccdc9Q8VC31 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Ccdc9Q8VC31 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Ccdc9Q8VC31 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC17.19■□□□□ 0.34
Ccdc9Q8VC31 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
Ccdc9Q8VC31 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Ccdc9Q8VC31 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ccdc9Q8VC31 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms