Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Nup35Q8R4R6 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Nup35Q8R4R6 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC11.68□□□□□ -0.54
Nup35Q8R4R6 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nup35Q8R4R6 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nup35Q8R4R6 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nup35Q8R4R6 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC11.68□□□□□ -0.54
Nup35Q8R4R6 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Nup35Q8R4R6 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Nup35Q8R4R6 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC11.68□□□□□ -0.54
Nup35Q8R4R6 Gm9182-201ENSMUST00000217829 639 ntBASIC11.68□□□□□ -0.54
Nup35Q8R4R6 AC102291.3-201ENSMUST00000226566 405 ntBASIC11.68□□□□□ -0.54
Nup35Q8R4R6 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nup35Q8R4R6 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nup35Q8R4R6 CT025610.1-201ENSMUST00000224552 1786 ntBASIC11.68□□□□□ -0.54
Nup35Q8R4R6 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nup35Q8R4R6 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nup35Q8R4R6 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC11.68□□□□□ -0.54
Nup35Q8R4R6 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Nup35Q8R4R6 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nup35Q8R4R6 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Nup35Q8R4R6 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC11.68□□□□□ -0.54
Nup35Q8R4R6 Gm6159-201ENSMUST00000191249 1724 ntBASIC11.68□□□□□ -0.54
Nup35Q8R4R6 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nup35Q8R4R6 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nup35Q8R4R6 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nup35Q8R4R6 Gm43570-201ENSMUST00000199951 3688 ntBASIC11.68□□□□□ -0.54
Nup35Q8R4R6 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nup35Q8R4R6 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC11.68□□□□□ -0.54
Nup35Q8R4R6 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Nup35Q8R4R6 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nup35Q8R4R6 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nup35Q8R4R6 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nup35Q8R4R6 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nup35Q8R4R6 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Nup35Q8R4R6 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nup35Q8R4R6 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nup35Q8R4R6 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Nup35Q8R4R6 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Nup35Q8R4R6 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Nup35Q8R4R6 Il17rd-203ENSMUST00000225146 3366 ntBASIC11.67□□□□□ -0.54
Nup35Q8R4R6 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nup35Q8R4R6 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC11.67□□□□□ -0.54
Nup35Q8R4R6 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nup35Q8R4R6 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nup35Q8R4R6 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nup35Q8R4R6 Gm14859-201ENSMUST00000117752 357 ntBASIC11.67□□□□□ -0.54
Nup35Q8R4R6 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Nup35Q8R4R6 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Nup35Q8R4R6 Gm17807-201ENSMUST00000186869 298 ntBASIC11.67□□□□□ -0.54
Nup35Q8R4R6 Gm8597-201ENSMUST00000191525 1109 ntBASIC11.67□□□□□ -0.54
Nup35Q8R4R6 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nup35Q8R4R6 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nup35Q8R4R6 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nup35Q8R4R6 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nup35Q8R4R6 AC164565.1-201ENSMUST00000217520 1484 ntBASIC11.67□□□□□ -0.54
Nup35Q8R4R6 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Nup35Q8R4R6 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nup35Q8R4R6 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nup35Q8R4R6 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nup35Q8R4R6 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Nup35Q8R4R6 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nup35Q8R4R6 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Nup35Q8R4R6 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC11.67□□□□□ -0.54
Nup35Q8R4R6 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nup35Q8R4R6 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nup35Q8R4R6 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Nup35Q8R4R6 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nup35Q8R4R6 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Nup35Q8R4R6 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nup35Q8R4R6 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Nup35Q8R4R6 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nup35Q8R4R6 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nup35Q8R4R6 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Nup35Q8R4R6 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nup35Q8R4R6 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Nup35Q8R4R6 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Nup35Q8R4R6 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nup35Q8R4R6 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nup35Q8R4R6 Gm13294-201ENSMUST00000121757 1330 ntBASIC11.66□□□□□ -0.54
Nup35Q8R4R6 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nup35Q8R4R6 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nup35Q8R4R6 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nup35Q8R4R6 Gm15889-202ENSMUST00000212669 2443 ntBASIC11.66□□□□□ -0.54
Nup35Q8R4R6 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nup35Q8R4R6 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nup35Q8R4R6 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nup35Q8R4R6 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nup35Q8R4R6 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nup35Q8R4R6 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Nup35Q8R4R6 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nup35Q8R4R6 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nup35Q8R4R6 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC11.66□□□□□ -0.54
Nup35Q8R4R6 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nup35Q8R4R6 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC11.66□□□□□ -0.54
Nup35Q8R4R6 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Nup35Q8R4R6 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Nup35Q8R4R6 Gm4899-201ENSMUST00000178708 719 ntBASIC11.66□□□□□ -0.54
Nup35Q8R4R6 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nup35Q8R4R6 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 64.8 ms