Protein–RNA interactions for Protein: Q8R3Q6

Ccdc58, Coiled-coil domain-containing protein 58, mousemouse

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc58Q8R3Q6 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
Ccdc58Q8R3Q6 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc58Q8R3Q6 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc58Q8R3Q6 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc58Q8R3Q6 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC12.86□□□□□ -0.35
Ccdc58Q8R3Q6 Gm27196-201ENSMUST00000184787 2582 ntBASIC12.86□□□□□ -0.35
Ccdc58Q8R3Q6 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc58Q8R3Q6 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Ccdc58Q8R3Q6 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc58Q8R3Q6 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc58Q8R3Q6 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Ccdc58Q8R3Q6 Gm10728-201ENSMUST00000194292 1829 ntBASIC12.86□□□□□ -0.35
Ccdc58Q8R3Q6 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc58Q8R3Q6 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc58Q8R3Q6 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc58Q8R3Q6 Gm45743-201ENSMUST00000212701 2795 ntBASIC12.86□□□□□ -0.35
Ccdc58Q8R3Q6 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc58Q8R3Q6 Gm37153-201ENSMUST00000193637 231 ntBASIC12.86□□□□□ -0.35
Ccdc58Q8R3Q6 Gm9682-201ENSMUST00000197505 556 ntBASIC12.86□□□□□ -0.35
Ccdc58Q8R3Q6 AC159106.1-201ENSMUST00000224421 690 ntBASIC12.86□□□□□ -0.35
Ccdc58Q8R3Q6 AC155729.1-201ENSMUST00000227758 544 ntBASIC12.86□□□□□ -0.35
Ccdc58Q8R3Q6 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc58Q8R3Q6 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc58Q8R3Q6 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc58Q8R3Q6 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc58Q8R3Q6 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc58Q8R3Q6 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC12.86□□□□□ -0.35
Ccdc58Q8R3Q6 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc58Q8R3Q6 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc58Q8R3Q6 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc58Q8R3Q6 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC12.86□□□□□ -0.35
Ccdc58Q8R3Q6 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc58Q8R3Q6 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc58Q8R3Q6 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc58Q8R3Q6 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc58Q8R3Q6 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC12.86□□□□□ -0.35
Ccdc58Q8R3Q6 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc58Q8R3Q6 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc58Q8R3Q6 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc58Q8R3Q6 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc58Q8R3Q6 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC12.86□□□□□ -0.35
Ccdc58Q8R3Q6 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc58Q8R3Q6 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc58Q8R3Q6 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc58Q8R3Q6 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc58Q8R3Q6 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Ccdc58Q8R3Q6 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC12.85□□□□□ -0.35
Ccdc58Q8R3Q6 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc58Q8R3Q6 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc58Q8R3Q6 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc58Q8R3Q6 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc58Q8R3Q6 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC12.85□□□□□ -0.35
Ccdc58Q8R3Q6 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc58Q8R3Q6 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc58Q8R3Q6 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc58Q8R3Q6 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc58Q8R3Q6 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc58Q8R3Q6 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC12.85□□□□□ -0.35
Ccdc58Q8R3Q6 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC12.85□□□□□ -0.35
Ccdc58Q8R3Q6 Gm7284-201ENSMUST00000131667 944 ntBASIC12.85□□□□□ -0.35
Ccdc58Q8R3Q6 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC12.85□□□□□ -0.35
Ccdc58Q8R3Q6 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc58Q8R3Q6 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc58Q8R3Q6 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc58Q8R3Q6 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc58Q8R3Q6 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc58Q8R3Q6 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Ccdc58Q8R3Q6 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc58Q8R3Q6 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc58Q8R3Q6 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc58Q8R3Q6 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
Ccdc58Q8R3Q6 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Ccdc58Q8R3Q6 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc58Q8R3Q6 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc58Q8R3Q6 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc58Q8R3Q6 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc58Q8R3Q6 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC12.85□□□□□ -0.35
Ccdc58Q8R3Q6 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc58Q8R3Q6 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC12.85□□□□□ -0.35
Ccdc58Q8R3Q6 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ccdc58Q8R3Q6 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ccdc58Q8R3Q6 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ccdc58Q8R3Q6 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Ccdc58Q8R3Q6 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ccdc58Q8R3Q6 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ccdc58Q8R3Q6 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC12.84□□□□□ -0.35
Ccdc58Q8R3Q6 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ccdc58Q8R3Q6 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Ccdc58Q8R3Q6 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ccdc58Q8R3Q6 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ccdc58Q8R3Q6 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ccdc58Q8R3Q6 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ccdc58Q8R3Q6 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ccdc58Q8R3Q6 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC12.84□□□□□ -0.35
Ccdc58Q8R3Q6 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ccdc58Q8R3Q6 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC12.84□□□□□ -0.35
Ccdc58Q8R3Q6 AC160338.1-201ENSMUST00000214232 705 ntBASIC12.84□□□□□ -0.35
Ccdc58Q8R3Q6 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ccdc58Q8R3Q6 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ccdc58Q8R3Q6 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms