Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Chmp7Q8R1T1 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Chmp7Q8R1T1 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Chmp7Q8R1T1 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Chmp7Q8R1T1 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Chmp7Q8R1T1 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Chmp7Q8R1T1 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Chmp7Q8R1T1 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Chmp7Q8R1T1 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Chmp7Q8R1T1 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Chmp7Q8R1T1 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Chmp7Q8R1T1 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Chmp7Q8R1T1 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
Chmp7Q8R1T1 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Chmp7Q8R1T1 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Chmp7Q8R1T1 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Chmp7Q8R1T1 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC18.23■□□□□ 0.51
Chmp7Q8R1T1 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC18.23■□□□□ 0.51
Chmp7Q8R1T1 Gm17150-201ENSMUST00000165577 381 ntBASIC18.23■□□□□ 0.51
Chmp7Q8R1T1 Gm6266-201ENSMUST00000203844 806 ntBASIC18.23■□□□□ 0.51
Chmp7Q8R1T1 Gm18307-201ENSMUST00000206864 949 ntBASIC18.23■□□□□ 0.51
Chmp7Q8R1T1 Gm5035-201ENSMUST00000215581 927 ntBASIC18.23■□□□□ 0.51
Chmp7Q8R1T1 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC18.23■□□□□ 0.51
Chmp7Q8R1T1 AC155252.1-201ENSMUST00000226462 1208 ntBASIC18.23■□□□□ 0.51
Chmp7Q8R1T1 AC102291.3-201ENSMUST00000226566 405 ntBASIC18.23■□□□□ 0.51
Chmp7Q8R1T1 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Chmp7Q8R1T1 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Chmp7Q8R1T1 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
Chmp7Q8R1T1 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC18.23■□□□□ 0.51
Chmp7Q8R1T1 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC18.23■□□□□ 0.51
Chmp7Q8R1T1 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Chmp7Q8R1T1 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Chmp7Q8R1T1 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Chmp7Q8R1T1 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Chmp7Q8R1T1 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC18.23■□□□□ 0.51
Chmp7Q8R1T1 Carlr-201ENSMUST00000181515 2574 ntBASIC18.23■□□□□ 0.51
Chmp7Q8R1T1 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Chmp7Q8R1T1 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Chmp7Q8R1T1 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC18.23■□□□□ 0.51
Chmp7Q8R1T1 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Chmp7Q8R1T1 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Chmp7Q8R1T1 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Chmp7Q8R1T1 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Chmp7Q8R1T1 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Chmp7Q8R1T1 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Chmp7Q8R1T1 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Chmp7Q8R1T1 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Chmp7Q8R1T1 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Chmp7Q8R1T1 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC18.22■□□□□ 0.51
Chmp7Q8R1T1 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Chmp7Q8R1T1 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Chmp7Q8R1T1 AC150560.1-201ENSMUST00000227731 1187 ntBASIC18.22■□□□□ 0.51
Chmp7Q8R1T1 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Chmp7Q8R1T1 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Chmp7Q8R1T1 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Chmp7Q8R1T1 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Chmp7Q8R1T1 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Chmp7Q8R1T1 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Chmp7Q8R1T1 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Chmp7Q8R1T1 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Chmp7Q8R1T1 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Chmp7Q8R1T1 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Chmp7Q8R1T1 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Chmp7Q8R1T1 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Chmp7Q8R1T1 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Chmp7Q8R1T1 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Chmp7Q8R1T1 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Chmp7Q8R1T1 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Chmp7Q8R1T1 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Chmp7Q8R1T1 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Chmp7Q8R1T1 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Chmp7Q8R1T1 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC18.21■□□□□ 0.51
Chmp7Q8R1T1 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Chmp7Q8R1T1 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Chmp7Q8R1T1 Gm18027-201ENSMUST00000218947 619 ntBASIC18.21■□□□□ 0.51
Chmp7Q8R1T1 AC155258.1-201ENSMUST00000219303 253 ntBASIC18.21■□□□□ 0.51
Chmp7Q8R1T1 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Chmp7Q8R1T1 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Chmp7Q8R1T1 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Chmp7Q8R1T1 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
Chmp7Q8R1T1 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Chmp7Q8R1T1 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Chmp7Q8R1T1 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Chmp7Q8R1T1 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Chmp7Q8R1T1 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Chmp7Q8R1T1 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Chmp7Q8R1T1 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Chmp7Q8R1T1 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC18.21■□□□□ 0.51
Chmp7Q8R1T1 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Chmp7Q8R1T1 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Chmp7Q8R1T1 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Chmp7Q8R1T1 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Chmp7Q8R1T1 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC18.2■□□□□ 0.5
Chmp7Q8R1T1 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Chmp7Q8R1T1 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Chmp7Q8R1T1 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC18.2■□□□□ 0.5
Chmp7Q8R1T1 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC18.2■□□□□ 0.5
Chmp7Q8R1T1 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Chmp7Q8R1T1 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
Chmp7Q8R1T1 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms