Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC13.05□□□□□ -0.32
Ebf4Q8K4J2 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Ebf4Q8K4J2 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ebf4Q8K4J2 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ebf4Q8K4J2 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Ebf4Q8K4J2 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ebf4Q8K4J2 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Ebf4Q8K4J2 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ebf4Q8K4J2 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ebf4Q8K4J2 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC13.05□□□□□ -0.32
Ebf4Q8K4J2 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Ebf4Q8K4J2 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Ebf4Q8K4J2 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ebf4Q8K4J2 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ebf4Q8K4J2 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Ebf4Q8K4J2 Gm8258-201ENSMUST00000055593 1449 ntBASIC13.05□□□□□ -0.32
Ebf4Q8K4J2 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
Ebf4Q8K4J2 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ebf4Q8K4J2 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Ebf4Q8K4J2 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ebf4Q8K4J2 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ebf4Q8K4J2 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ebf4Q8K4J2 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ebf4Q8K4J2 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ebf4Q8K4J2 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ebf4Q8K4J2 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Ebf4Q8K4J2 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ebf4Q8K4J2 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Ebf4Q8K4J2 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Ebf4Q8K4J2 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ebf4Q8K4J2 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ebf4Q8K4J2 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ebf4Q8K4J2 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Ebf4Q8K4J2 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Ebf4Q8K4J2 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ebf4Q8K4J2 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ebf4Q8K4J2 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ebf4Q8K4J2 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Ebf4Q8K4J2 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ebf4Q8K4J2 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ebf4Q8K4J2 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ebf4Q8K4J2 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC13.04□□□□□ -0.32
Ebf4Q8K4J2 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ebf4Q8K4J2 Gm29518-201ENSMUST00000190858 372 ntBASIC13.04□□□□□ -0.32
Ebf4Q8K4J2 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC13.04□□□□□ -0.32
Ebf4Q8K4J2 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Ebf4Q8K4J2 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ebf4Q8K4J2 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC13.04□□□□□ -0.32
Ebf4Q8K4J2 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ebf4Q8K4J2 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ebf4Q8K4J2 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ebf4Q8K4J2 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Ebf4Q8K4J2 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ebf4Q8K4J2 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ebf4Q8K4J2 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC13.04□□□□□ -0.32
Ebf4Q8K4J2 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Ebf4Q8K4J2 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Ebf4Q8K4J2 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
Ebf4Q8K4J2 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Ebf4Q8K4J2 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ebf4Q8K4J2 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ebf4Q8K4J2 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ebf4Q8K4J2 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Ebf4Q8K4J2 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC13.04□□□□□ -0.32
Ebf4Q8K4J2 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Ebf4Q8K4J2 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ebf4Q8K4J2 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ebf4Q8K4J2 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Ebf4Q8K4J2 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Ebf4Q8K4J2 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC13.04□□□□□ -0.32
Ebf4Q8K4J2 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ebf4Q8K4J2 Gm9924-202ENSMUST00000192760 2311 ntBASIC13.04□□□□□ -0.32
Ebf4Q8K4J2 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Ebf4Q8K4J2 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ebf4Q8K4J2 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC13.03□□□□□ -0.32
Ebf4Q8K4J2 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC13.03□□□□□ -0.32
Ebf4Q8K4J2 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ebf4Q8K4J2 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ebf4Q8K4J2 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ebf4Q8K4J2 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Ebf4Q8K4J2 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ebf4Q8K4J2 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ebf4Q8K4J2 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ebf4Q8K4J2 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ebf4Q8K4J2 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ebf4Q8K4J2 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC13.03□□□□□ -0.32
Ebf4Q8K4J2 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ebf4Q8K4J2 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ebf4Q8K4J2 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ebf4Q8K4J2 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ebf4Q8K4J2 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Ebf4Q8K4J2 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ebf4Q8K4J2 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ebf4Q8K4J2 Gm6296-201ENSMUST00000222599 943 ntBASIC13.03□□□□□ -0.32
Ebf4Q8K4J2 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ebf4Q8K4J2 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC13.03□□□□□ -0.32
Ebf4Q8K4J2 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ebf4Q8K4J2 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ebf4Q8K4J2 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Ebf4Q8K4J2 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms