Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Clrn1Q8K445 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Clrn1Q8K445 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Clrn1Q8K445 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Clrn1Q8K445 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Clrn1Q8K445 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Clrn1Q8K445 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC13.52□□□□□ -0.25
Clrn1Q8K445 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC13.52□□□□□ -0.25
Clrn1Q8K445 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Clrn1Q8K445 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Clrn1Q8K445 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Clrn1Q8K445 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Clrn1Q8K445 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Clrn1Q8K445 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Clrn1Q8K445 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC13.52□□□□□ -0.25
Clrn1Q8K445 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Clrn1Q8K445 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Clrn1Q8K445 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Clrn1Q8K445 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Clrn1Q8K445 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Clrn1Q8K445 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Clrn1Q8K445 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Clrn1Q8K445 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Clrn1Q8K445 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Clrn1Q8K445 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Clrn1Q8K445 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Clrn1Q8K445 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Clrn1Q8K445 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Clrn1Q8K445 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC13.51□□□□□ -0.25
Clrn1Q8K445 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Clrn1Q8K445 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Clrn1Q8K445 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Clrn1Q8K445 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC13.51□□□□□ -0.25
Clrn1Q8K445 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Clrn1Q8K445 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Clrn1Q8K445 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC13.51□□□□□ -0.25
Clrn1Q8K445 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC13.51□□□□□ -0.25
Clrn1Q8K445 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Clrn1Q8K445 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Clrn1Q8K445 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC13.51□□□□□ -0.25
Clrn1Q8K445 AC158529.1-201ENSMUST00000223618 239 ntBASIC13.51□□□□□ -0.25
Clrn1Q8K445 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Clrn1Q8K445 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Clrn1Q8K445 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Clrn1Q8K445 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Clrn1Q8K445 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Clrn1Q8K445 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Clrn1Q8K445 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Clrn1Q8K445 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Clrn1Q8K445 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Clrn1Q8K445 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Clrn1Q8K445 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Clrn1Q8K445 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Clrn1Q8K445 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Clrn1Q8K445 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Clrn1Q8K445 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Clrn1Q8K445 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Clrn1Q8K445 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Clrn1Q8K445 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Clrn1Q8K445 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Clrn1Q8K445 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Clrn1Q8K445 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC13.5□□□□□ -0.25
Clrn1Q8K445 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Clrn1Q8K445 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Clrn1Q8K445 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Clrn1Q8K445 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Clrn1Q8K445 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Clrn1Q8K445 Gm23935-201ENSMUST00000102303 57 ntBASIC13.5□□□□□ -0.25
Clrn1Q8K445 Gm24270-201ENSMUST00000102326 57 ntBASIC13.5□□□□□ -0.25
Clrn1Q8K445 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Clrn1Q8K445 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Clrn1Q8K445 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Clrn1Q8K445 Gm24245-201ENSMUST00000157318 57 ntBASIC13.5□□□□□ -0.25
Clrn1Q8K445 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC13.5□□□□□ -0.25
Clrn1Q8K445 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC13.5□□□□□ -0.25
Clrn1Q8K445 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Clrn1Q8K445 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC13.5□□□□□ -0.25
Clrn1Q8K445 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Clrn1Q8K445 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Clrn1Q8K445 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Clrn1Q8K445 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Clrn1Q8K445 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Clrn1Q8K445 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Clrn1Q8K445 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Clrn1Q8K445 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Clrn1Q8K445 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Clrn1Q8K445 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Clrn1Q8K445 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Clrn1Q8K445 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Clrn1Q8K445 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC13.5□□□□□ -0.25
Clrn1Q8K445 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Clrn1Q8K445 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Clrn1Q8K445 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC13.5□□□□□ -0.25
Clrn1Q8K445 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC13.5□□□□□ -0.25
Clrn1Q8K445 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Clrn1Q8K445 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC13.5□□□□□ -0.25
Clrn1Q8K445 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
Clrn1Q8K445 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Clrn1Q8K445 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Clrn1Q8K445 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 69.7 ms