Protein–RNA interactions for Protein: Q8K243

Trim68, E3 ubiquitin-protein ligase TRIM68, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim68Q8K243 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim68Q8K243 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC15.54■□□□□ 0.08
Trim68Q8K243 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim68Q8K243 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Trim68Q8K243 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim68Q8K243 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim68Q8K243 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim68Q8K243 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Trim68Q8K243 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim68Q8K243 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trim68Q8K243 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trim68Q8K243 Gm15593-201ENSMUST00000122085 1008 ntBASIC15.54■□□□□ 0.08
Trim68Q8K243 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
Trim68Q8K243 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC15.54■□□□□ 0.08
Trim68Q8K243 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
Trim68Q8K243 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
Trim68Q8K243 Gm12091-201ENSMUST00000146791 830 ntBASIC15.54■□□□□ 0.08
Trim68Q8K243 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trim68Q8K243 Gm9719-201ENSMUST00000162765 543 ntBASIC15.54■□□□□ 0.08
Trim68Q8K243 Gm8602-201ENSMUST00000184045 607 ntBASIC15.54■□□□□ 0.08
Trim68Q8K243 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC15.54■□□□□ 0.08
Trim68Q8K243 Gm9908-201ENSMUST00000211534 448 ntBASIC15.54■□□□□ 0.08
Trim68Q8K243 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim68Q8K243 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trim68Q8K243 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim68Q8K243 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim68Q8K243 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim68Q8K243 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trim68Q8K243 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Trim68Q8K243 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim68Q8K243 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC15.54■□□□□ 0.08
Trim68Q8K243 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim68Q8K243 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim68Q8K243 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim68Q8K243 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim68Q8K243 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim68Q8K243 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim68Q8K243 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim68Q8K243 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim68Q8K243 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim68Q8K243 Sorbs3-204ENSMUST00000227929 2460 ntBASIC15.53■□□□□ 0.08
Trim68Q8K243 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trim68Q8K243 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim68Q8K243 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim68Q8K243 Mir1897-201ENSMUST00000122581 272 ntBASIC15.53■□□□□ 0.08
Trim68Q8K243 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC15.53■□□□□ 0.08
Trim68Q8K243 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC15.53■□□□□ 0.08
Trim68Q8K243 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trim68Q8K243 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim68Q8K243 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim68Q8K243 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim68Q8K243 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC15.53■□□□□ 0.08
Trim68Q8K243 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC15.53■□□□□ 0.08
Trim68Q8K243 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim68Q8K243 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC15.53■□□□□ 0.08
Trim68Q8K243 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trim68Q8K243 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim68Q8K243 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim68Q8K243 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC15.53■□□□□ 0.08
Trim68Q8K243 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trim68Q8K243 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trim68Q8K243 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trim68Q8K243 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trim68Q8K243 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Trim68Q8K243 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trim68Q8K243 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trim68Q8K243 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trim68Q8K243 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC15.52■□□□□ 0.08
Trim68Q8K243 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trim68Q8K243 Gm4875-201ENSMUST00000118257 786 ntBASIC15.52■□□□□ 0.08
Trim68Q8K243 Gm14042-201ENSMUST00000120139 833 ntBASIC15.52■□□□□ 0.08
Trim68Q8K243 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC15.52■□□□□ 0.08
Trim68Q8K243 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
Trim68Q8K243 Mir7085-201ENSMUST00000184353 66 ntBASIC15.52■□□□□ 0.08
Trim68Q8K243 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC15.52■□□□□ 0.08
Trim68Q8K243 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trim68Q8K243 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
Trim68Q8K243 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trim68Q8K243 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trim68Q8K243 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trim68Q8K243 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trim68Q8K243 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Trim68Q8K243 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trim68Q8K243 Gm44291-201ENSMUST00000203102 2865 ntBASIC15.52■□□□□ 0.07
Trim68Q8K243 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Trim68Q8K243 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trim68Q8K243 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trim68Q8K243 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim68Q8K243 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC15.51■□□□□ 0.07
Trim68Q8K243 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim68Q8K243 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim68Q8K243 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trim68Q8K243 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC15.51■□□□□ 0.07
Trim68Q8K243 Gm5566-201ENSMUST00000116118 459 ntBASIC15.51■□□□□ 0.07
Trim68Q8K243 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Trim68Q8K243 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trim68Q8K243 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC15.51■□□□□ 0.07
Trim68Q8K243 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC15.51■□□□□ 0.07
Trim68Q8K243 CT009510.1-201ENSMUST00000227972 270 ntBASIC15.51■□□□□ 0.07
Trim68Q8K243 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms