Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Nup88Q8CEC0 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
Nup88Q8CEC0 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Nup88Q8CEC0 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Nup88Q8CEC0 Gm4081-201ENSMUST00000195287 1838 ntBASIC16.91■□□□□ 0.3
Nup88Q8CEC0 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC16.91■□□□□ 0.3
Nup88Q8CEC0 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nup88Q8CEC0 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nup88Q8CEC0 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nup88Q8CEC0 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nup88Q8CEC0 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Nup88Q8CEC0 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Nup88Q8CEC0 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nup88Q8CEC0 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Nup88Q8CEC0 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nup88Q8CEC0 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nup88Q8CEC0 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC16.9■□□□□ 0.3
Nup88Q8CEC0 Gm28182-201ENSMUST00000188354 2477 ntBASIC16.9■□□□□ 0.3
Nup88Q8CEC0 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nup88Q8CEC0 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Nup88Q8CEC0 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC16.9■□□□□ 0.3
Nup88Q8CEC0 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nup88Q8CEC0 Gm6973-201ENSMUST00000117080 721 ntBASIC16.9■□□□□ 0.3
Nup88Q8CEC0 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nup88Q8CEC0 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nup88Q8CEC0 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nup88Q8CEC0 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC16.9■□□□□ 0.3
Nup88Q8CEC0 AC166574.6-201ENSMUST00000227889 1806 ntBASIC16.9■□□□□ 0.3
Nup88Q8CEC0 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Nup88Q8CEC0 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
Nup88Q8CEC0 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nup88Q8CEC0 Gm38391-201ENSMUST00000191720 4069 ntBASIC16.9■□□□□ 0.3
Nup88Q8CEC0 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nup88Q8CEC0 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nup88Q8CEC0 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Nup88Q8CEC0 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Nup88Q8CEC0 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC16.89■□□□□ 0.29
Nup88Q8CEC0 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC16.89■□□□□ 0.29
Nup88Q8CEC0 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nup88Q8CEC0 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Nup88Q8CEC0 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Nup88Q8CEC0 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Nup88Q8CEC0 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nup88Q8CEC0 Gm24158-201ENSMUST00000175263 71 ntBASIC16.89■□□□□ 0.29
Nup88Q8CEC0 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC16.89■□□□□ 0.29
Nup88Q8CEC0 Gm27430-201ENSMUST00000184585 107 ntBASIC16.89■□□□□ 0.29
Nup88Q8CEC0 Gm27321-201ENSMUST00000185021 205 ntBASIC16.89■□□□□ 0.29
Nup88Q8CEC0 Gm44333-201ENSMUST00000197168 107 ntBASIC16.89■□□□□ 0.29
Nup88Q8CEC0 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC16.89■□□□□ 0.29
Nup88Q8CEC0 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC16.89■□□□□ 0.29
Nup88Q8CEC0 CT010506.4-201ENSMUST00000225457 351 ntBASIC16.89■□□□□ 0.29
Nup88Q8CEC0 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nup88Q8CEC0 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Nup88Q8CEC0 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Nup88Q8CEC0 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nup88Q8CEC0 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nup88Q8CEC0 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
Nup88Q8CEC0 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Nup88Q8CEC0 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Nup88Q8CEC0 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Nup88Q8CEC0 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nup88Q8CEC0 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Nup88Q8CEC0 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Nup88Q8CEC0 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nup88Q8CEC0 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nup88Q8CEC0 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nup88Q8CEC0 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nup88Q8CEC0 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
Nup88Q8CEC0 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nup88Q8CEC0 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nup88Q8CEC0 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nup88Q8CEC0 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
Nup88Q8CEC0 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nup88Q8CEC0 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nup88Q8CEC0 Trav13-3-201ENSMUST00000117226 336 ntBASIC16.88■□□□□ 0.29
Nup88Q8CEC0 Gm15693-201ENSMUST00000120470 637 ntBASIC16.88■□□□□ 0.29
Nup88Q8CEC0 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Nup88Q8CEC0 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Nup88Q8CEC0 Gm16026-204ENSMUST00000162652 683 ntBASIC16.88■□□□□ 0.29
Nup88Q8CEC0 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC16.88■□□□□ 0.29
Nup88Q8CEC0 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Nup88Q8CEC0 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Nup88Q8CEC0 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nup88Q8CEC0 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nup88Q8CEC0 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Nup88Q8CEC0 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nup88Q8CEC0 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
Nup88Q8CEC0 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nup88Q8CEC0 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nup88Q8CEC0 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nup88Q8CEC0 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Nup88Q8CEC0 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC16.87■□□□□ 0.29
Nup88Q8CEC0 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nup88Q8CEC0 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nup88Q8CEC0 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC16.87■□□□□ 0.29
Nup88Q8CEC0 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Nup88Q8CEC0 Gm18737-201ENSMUST00000173594 937 ntBASIC16.87■□□□□ 0.29
Nup88Q8CEC0 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC16.87■□□□□ 0.29
Nup88Q8CEC0 AC166341.4-201ENSMUST00000220625 123 ntBASIC16.87■□□□□ 0.29
Nup88Q8CEC0 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms