Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC12.84□□□□□ -0.35
Lysmd4Q8CC84 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lysmd4Q8CC84 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Lysmd4Q8CC84 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Lysmd4Q8CC84 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lysmd4Q8CC84 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Lysmd4Q8CC84 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Lysmd4Q8CC84 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.35
Lysmd4Q8CC84 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Lysmd4Q8CC84 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lysmd4Q8CC84 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lysmd4Q8CC84 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lysmd4Q8CC84 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Lysmd4Q8CC84 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lysmd4Q8CC84 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lysmd4Q8CC84 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
Lysmd4Q8CC84 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC12.83□□□□□ -0.36
Lysmd4Q8CC84 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC12.83□□□□□ -0.36
Lysmd4Q8CC84 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC12.83□□□□□ -0.36
Lysmd4Q8CC84 Gm16026-204ENSMUST00000162652 683 ntBASIC12.83□□□□□ -0.36
Lysmd4Q8CC84 Gm6550-201ENSMUST00000187574 993 ntBASIC12.83□□□□□ -0.36
Lysmd4Q8CC84 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC12.83□□□□□ -0.36
Lysmd4Q8CC84 Gm34391-201ENSMUST00000203706 907 ntBASIC12.83□□□□□ -0.36
Lysmd4Q8CC84 Gm45747-201ENSMUST00000212203 999 ntBASIC12.83□□□□□ -0.36
Lysmd4Q8CC84 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC12.83□□□□□ -0.36
Lysmd4Q8CC84 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC12.83□□□□□ -0.36
Lysmd4Q8CC84 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Lysmd4Q8CC84 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lysmd4Q8CC84 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Lysmd4Q8CC84 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Lysmd4Q8CC84 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lysmd4Q8CC84 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lysmd4Q8CC84 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lysmd4Q8CC84 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lysmd4Q8CC84 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lysmd4Q8CC84 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lysmd4Q8CC84 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lysmd4Q8CC84 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lysmd4Q8CC84 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lysmd4Q8CC84 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lysmd4Q8CC84 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lysmd4Q8CC84 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lysmd4Q8CC84 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lysmd4Q8CC84 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lysmd4Q8CC84 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lysmd4Q8CC84 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Lysmd4Q8CC84 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lysmd4Q8CC84 AC122901.1-201ENSMUST00000214203 1790 ntBASIC12.82□□□□□ -0.36
Lysmd4Q8CC84 Il17rd-203ENSMUST00000225146 3366 ntBASIC12.82□□□□□ -0.36
Lysmd4Q8CC84 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lysmd4Q8CC84 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC12.82□□□□□ -0.36
Lysmd4Q8CC84 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC12.82□□□□□ -0.36
Lysmd4Q8CC84 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lysmd4Q8CC84 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lysmd4Q8CC84 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lysmd4Q8CC84 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lysmd4Q8CC84 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Lysmd4Q8CC84 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lysmd4Q8CC84 Gm38094-201ENSMUST00000195864 2978 ntBASIC12.82□□□□□ -0.36
Lysmd4Q8CC84 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lysmd4Q8CC84 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lysmd4Q8CC84 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lysmd4Q8CC84 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lysmd4Q8CC84 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Lysmd4Q8CC84 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Lysmd4Q8CC84 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lysmd4Q8CC84 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lysmd4Q8CC84 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lysmd4Q8CC84 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lysmd4Q8CC84 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Lysmd4Q8CC84 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lysmd4Q8CC84 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lysmd4Q8CC84 Nudt18-203ENSMUST00000228768 1578 ntBASIC12.81□□□□□ -0.36
Lysmd4Q8CC84 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Lysmd4Q8CC84 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lysmd4Q8CC84 Gm12500-202ENSMUST00000186471 2428 ntBASIC12.81□□□□□ -0.36
Lysmd4Q8CC84 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lysmd4Q8CC84 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Lysmd4Q8CC84 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lysmd4Q8CC84 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lysmd4Q8CC84 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Lysmd4Q8CC84 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lysmd4Q8CC84 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Lysmd4Q8CC84 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC12.81□□□□□ -0.36
Lysmd4Q8CC84 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Lysmd4Q8CC84 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC12.81□□□□□ -0.36
Lysmd4Q8CC84 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lysmd4Q8CC84 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lysmd4Q8CC84 Gm24589-201ENSMUST00000116692 94 ntBASIC12.81□□□□□ -0.36
Lysmd4Q8CC84 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC12.81□□□□□ -0.36
Lysmd4Q8CC84 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC12.81□□□□□ -0.36
Lysmd4Q8CC84 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC12.81□□□□□ -0.36
Lysmd4Q8CC84 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lysmd4Q8CC84 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lysmd4Q8CC84 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC12.81□□□□□ -0.36
Lysmd4Q8CC84 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lysmd4Q8CC84 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lysmd4Q8CC84 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Lysmd4Q8CC84 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lysmd4Q8CC84 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms