Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 AC121598.1-201ENSMUST00000228224 1019 ntBASIC15.79■□□□□ 0.12
Trim9Q8C7M3 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trim9Q8C7M3 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim9Q8C7M3 AC166574.6-201ENSMUST00000227889 1806 ntBASIC15.79■□□□□ 0.12
Trim9Q8C7M3 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC15.79■□□□□ 0.12
Trim9Q8C7M3 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim9Q8C7M3 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Trim9Q8C7M3 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim9Q8C7M3 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trim9Q8C7M3 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Trim9Q8C7M3 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trim9Q8C7M3 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Trim9Q8C7M3 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trim9Q8C7M3 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim9Q8C7M3 Gm26513-201ENSMUST00000181802 2489 ntBASIC15.78■□□□□ 0.12
Trim9Q8C7M3 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trim9Q8C7M3 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trim9Q8C7M3 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim9Q8C7M3 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim9Q8C7M3 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim9Q8C7M3 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC15.78■□□□□ 0.12
Trim9Q8C7M3 Gm18766-201ENSMUST00000189811 808 ntBASIC15.78■□□□□ 0.12
Trim9Q8C7M3 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC15.78■□□□□ 0.12
Trim9Q8C7M3 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC15.78■□□□□ 0.12
Trim9Q8C7M3 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim9Q8C7M3 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim9Q8C7M3 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim9Q8C7M3 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC15.78■□□□□ 0.12
Trim9Q8C7M3 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim9Q8C7M3 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim9Q8C7M3 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim9Q8C7M3 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trim9Q8C7M3 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim9Q8C7M3 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Trim9Q8C7M3 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
Trim9Q8C7M3 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Trim9Q8C7M3 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Trim9Q8C7M3 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trim9Q8C7M3 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC15.77■□□□□ 0.12
Trim9Q8C7M3 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Trim9Q8C7M3 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trim9Q8C7M3 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Trim9Q8C7M3 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trim9Q8C7M3 Gm43056-201ENSMUST00000197865 2791 ntBASIC15.77■□□□□ 0.12
Trim9Q8C7M3 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Trim9Q8C7M3 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trim9Q8C7M3 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trim9Q8C7M3 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trim9Q8C7M3 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trim9Q8C7M3 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trim9Q8C7M3 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trim9Q8C7M3 Gm15957-201ENSMUST00000118893 974 ntBASIC15.77■□□□□ 0.12
Trim9Q8C7M3 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Trim9Q8C7M3 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC15.77■□□□□ 0.12
Trim9Q8C7M3 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trim9Q8C7M3 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trim9Q8C7M3 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Trim9Q8C7M3 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC15.77■□□□□ 0.12
Trim9Q8C7M3 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC15.77■□□□□ 0.12
Trim9Q8C7M3 AC149588.3-201ENSMUST00000227515 150 ntBASIC15.77■□□□□ 0.12
Trim9Q8C7M3 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trim9Q8C7M3 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trim9Q8C7M3 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC15.77■□□□□ 0.12
Trim9Q8C7M3 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trim9Q8C7M3 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trim9Q8C7M3 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
Trim9Q8C7M3 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Trim9Q8C7M3 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Trim9Q8C7M3 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trim9Q8C7M3 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
Trim9Q8C7M3 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trim9Q8C7M3 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trim9Q8C7M3 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trim9Q8C7M3 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trim9Q8C7M3 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
Trim9Q8C7M3 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Trim9Q8C7M3 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trim9Q8C7M3 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trim9Q8C7M3 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trim9Q8C7M3 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Trim9Q8C7M3 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC15.76■□□□□ 0.11
Trim9Q8C7M3 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trim9Q8C7M3 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Trim9Q8C7M3 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trim9Q8C7M3 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trim9Q8C7M3 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trim9Q8C7M3 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trim9Q8C7M3 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trim9Q8C7M3 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trim9Q8C7M3 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trim9Q8C7M3 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trim9Q8C7M3 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trim9Q8C7M3 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Trim9Q8C7M3 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC15.76■□□□□ 0.11
Trim9Q8C7M3 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trim9Q8C7M3 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trim9Q8C7M3 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trim9Q8C7M3 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Trim9Q8C7M3 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC15.76■□□□□ 0.11
Trim9Q8C7M3 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms