Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Ccdc60Q8C4J0 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ccdc60Q8C4J0 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Ccdc60Q8C4J0 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ccdc60Q8C4J0 Ssr1-204ENSMUST00000225319 1610 ntBASIC18.25■□□□□ 0.51
Ccdc60Q8C4J0 Gm24543-201ENSMUST00000103867 82 ntBASIC18.25■□□□□ 0.51
Ccdc60Q8C4J0 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ccdc60Q8C4J0 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Ccdc60Q8C4J0 Dupd1-202ENSMUST00000224735 548 ntBASIC18.25■□□□□ 0.51
Ccdc60Q8C4J0 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ccdc60Q8C4J0 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ccdc60Q8C4J0 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ccdc60Q8C4J0 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ccdc60Q8C4J0 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ccdc60Q8C4J0 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ccdc60Q8C4J0 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ccdc60Q8C4J0 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC18.24■□□□□ 0.51
Ccdc60Q8C4J0 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Ccdc60Q8C4J0 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ccdc60Q8C4J0 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ccdc60Q8C4J0 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Ccdc60Q8C4J0 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Ccdc60Q8C4J0 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ccdc60Q8C4J0 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC18.24■□□□□ 0.51
Ccdc60Q8C4J0 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ccdc60Q8C4J0 Mir6956-201ENSMUST00000183598 62 ntBASIC18.24■□□□□ 0.51
Ccdc60Q8C4J0 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC18.24■□□□□ 0.51
Ccdc60Q8C4J0 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ccdc60Q8C4J0 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ccdc60Q8C4J0 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Ccdc60Q8C4J0 Gm45751-201ENSMUST00000210185 1573 ntBASIC18.24■□□□□ 0.51
Ccdc60Q8C4J0 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ccdc60Q8C4J0 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Ccdc60Q8C4J0 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ccdc60Q8C4J0 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ccdc60Q8C4J0 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Ccdc60Q8C4J0 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ccdc60Q8C4J0 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ccdc60Q8C4J0 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ccdc60Q8C4J0 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ccdc60Q8C4J0 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC18.23■□□□□ 0.51
Ccdc60Q8C4J0 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Ccdc60Q8C4J0 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Ccdc60Q8C4J0 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC18.23■□□□□ 0.51
Ccdc60Q8C4J0 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC18.23■□□□□ 0.51
Ccdc60Q8C4J0 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Ccdc60Q8C4J0 Gm27533-201ENSMUST00000183800 152 ntBASIC18.23■□□□□ 0.51
Ccdc60Q8C4J0 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC18.23■□□□□ 0.51
Ccdc60Q8C4J0 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
Ccdc60Q8C4J0 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ccdc60Q8C4J0 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC18.23■□□□□ 0.51
Ccdc60Q8C4J0 Gm16476-201ENSMUST00000221544 139 ntBASIC18.23■□□□□ 0.51
Ccdc60Q8C4J0 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ccdc60Q8C4J0 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ccdc60Q8C4J0 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Ccdc60Q8C4J0 Mir125a-201ENSMUST00000083545 68 ntBASIC18.23■□□□□ 0.51
Ccdc60Q8C4J0 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Ccdc60Q8C4J0 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Ccdc60Q8C4J0 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC18.23■□□□□ 0.51
Ccdc60Q8C4J0 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ccdc60Q8C4J0 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Ccdc60Q8C4J0 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ccdc60Q8C4J0 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ccdc60Q8C4J0 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ccdc60Q8C4J0 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ccdc60Q8C4J0 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Ccdc60Q8C4J0 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Ccdc60Q8C4J0 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ccdc60Q8C4J0 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ccdc60Q8C4J0 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ccdc60Q8C4J0 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ccdc60Q8C4J0 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
Ccdc60Q8C4J0 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Ccdc60Q8C4J0 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Ccdc60Q8C4J0 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ccdc60Q8C4J0 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ccdc60Q8C4J0 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ccdc60Q8C4J0 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ccdc60Q8C4J0 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC18.22■□□□□ 0.51
Ccdc60Q8C4J0 Gm12428-201ENSMUST00000119844 727 ntBASIC18.22■□□□□ 0.51
Ccdc60Q8C4J0 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC18.22■□□□□ 0.51
Ccdc60Q8C4J0 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ccdc60Q8C4J0 AA619741-201ENSMUST00000195095 646 ntBASIC18.22■□□□□ 0.51
Ccdc60Q8C4J0 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC18.22■□□□□ 0.51
Ccdc60Q8C4J0 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Ccdc60Q8C4J0 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ccdc60Q8C4J0 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ccdc60Q8C4J0 Gm6159-201ENSMUST00000191249 1724 ntBASIC18.22■□□□□ 0.51
Ccdc60Q8C4J0 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Ccdc60Q8C4J0 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ccdc60Q8C4J0 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ccdc60Q8C4J0 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ccdc60Q8C4J0 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ccdc60Q8C4J0 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ccdc60Q8C4J0 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC18.22■□□□□ 0.51
Ccdc60Q8C4J0 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ccdc60Q8C4J0 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ccdc60Q8C4J0 Gm5421-201ENSMUST00000181698 2354 ntBASIC18.22■□□□□ 0.51
Ccdc60Q8C4J0 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ccdc60Q8C4J0 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC18.21■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms