Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC12□□□□□ -0.49
Tsen54Q8C2A2 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Tsen54Q8C2A2 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC12□□□□□ -0.49
Tsen54Q8C2A2 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Tsen54Q8C2A2 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tsen54Q8C2A2 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Tsen54Q8C2A2 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tsen54Q8C2A2 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tsen54Q8C2A2 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tsen54Q8C2A2 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tsen54Q8C2A2 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Tsen54Q8C2A2 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC11.99□□□□□ -0.49
Tsen54Q8C2A2 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tsen54Q8C2A2 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Tsen54Q8C2A2 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tsen54Q8C2A2 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tsen54Q8C2A2 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tsen54Q8C2A2 Gm8344-201ENSMUST00000119813 856 ntBASIC11.99□□□□□ -0.49
Tsen54Q8C2A2 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC11.99□□□□□ -0.49
Tsen54Q8C2A2 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Tsen54Q8C2A2 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC11.99□□□□□ -0.49
Tsen54Q8C2A2 AC161829.1-201ENSMUST00000220298 281 ntBASIC11.99□□□□□ -0.49
Tsen54Q8C2A2 Mzt1-203ENSMUST00000227948 952 ntBASIC11.99□□□□□ -0.49
Tsen54Q8C2A2 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tsen54Q8C2A2 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tsen54Q8C2A2 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tsen54Q8C2A2 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tsen54Q8C2A2 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
Tsen54Q8C2A2 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC11.99□□□□□ -0.49
Tsen54Q8C2A2 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Tsen54Q8C2A2 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Tsen54Q8C2A2 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tsen54Q8C2A2 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tsen54Q8C2A2 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tsen54Q8C2A2 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tsen54Q8C2A2 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Tsen54Q8C2A2 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tsen54Q8C2A2 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tsen54Q8C2A2 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tsen54Q8C2A2 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC11.98□□□□□ -0.49
Tsen54Q8C2A2 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tsen54Q8C2A2 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tsen54Q8C2A2 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Tsen54Q8C2A2 Gm42829-201ENSMUST00000198417 2585 ntBASIC11.98□□□□□ -0.49
Tsen54Q8C2A2 Gm10305-201ENSMUST00000195331 2475 ntBASIC11.98□□□□□ -0.49
Tsen54Q8C2A2 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tsen54Q8C2A2 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Tsen54Q8C2A2 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tsen54Q8C2A2 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tsen54Q8C2A2 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Tsen54Q8C2A2 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tsen54Q8C2A2 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tsen54Q8C2A2 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Tsen54Q8C2A2 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tsen54Q8C2A2 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tsen54Q8C2A2 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tsen54Q8C2A2 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tsen54Q8C2A2 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Tsen54Q8C2A2 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Tsen54Q8C2A2 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tsen54Q8C2A2 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Tsen54Q8C2A2 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Tsen54Q8C2A2 Gm13418-201ENSMUST00000119097 944 ntBASIC11.98□□□□□ -0.49
Tsen54Q8C2A2 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC11.98□□□□□ -0.49
Tsen54Q8C2A2 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Tsen54Q8C2A2 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC11.98□□□□□ -0.49
Tsen54Q8C2A2 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC11.98□□□□□ -0.49
Tsen54Q8C2A2 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Tsen54Q8C2A2 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Tsen54Q8C2A2 AC117588.1-201ENSMUST00000228510 999 ntBASIC11.98□□□□□ -0.49
Tsen54Q8C2A2 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tsen54Q8C2A2 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tsen54Q8C2A2 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Tsen54Q8C2A2 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tsen54Q8C2A2 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tsen54Q8C2A2 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tsen54Q8C2A2 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tsen54Q8C2A2 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tsen54Q8C2A2 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tsen54Q8C2A2 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tsen54Q8C2A2 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tsen54Q8C2A2 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tsen54Q8C2A2 Gm37644-201ENSMUST00000192190 2270 ntBASIC11.98□□□□□ -0.49
Tsen54Q8C2A2 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Tsen54Q8C2A2 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Tsen54Q8C2A2 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tsen54Q8C2A2 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tsen54Q8C2A2 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tsen54Q8C2A2 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Tsen54Q8C2A2 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tsen54Q8C2A2 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tsen54Q8C2A2 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tsen54Q8C2A2 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Tsen54Q8C2A2 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tsen54Q8C2A2 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tsen54Q8C2A2 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tsen54Q8C2A2 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tsen54Q8C2A2 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Tsen54Q8C2A2 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Tsen54Q8C2A2 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms