Protein–RNA interactions for Protein: Q8BXJ2

Trerf1, Transcriptional-regulating factor 1, mousemouse

Predictions only

Length 1,205 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1Q8BXJ2 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trerf1Q8BXJ2 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trerf1Q8BXJ2 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Trerf1Q8BXJ2 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trerf1Q8BXJ2 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trerf1Q8BXJ2 Gm45612-201ENSMUST00000211320 160 ntBASIC15.13■□□□□ 0.01
Trerf1Q8BXJ2 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trerf1Q8BXJ2 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trerf1Q8BXJ2 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trerf1Q8BXJ2 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trerf1Q8BXJ2 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trerf1Q8BXJ2 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trerf1Q8BXJ2 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trerf1Q8BXJ2 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Trerf1Q8BXJ2 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trerf1Q8BXJ2 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Trerf1Q8BXJ2 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trerf1Q8BXJ2 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trerf1Q8BXJ2 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trerf1Q8BXJ2 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trerf1Q8BXJ2 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trerf1Q8BXJ2 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC15.13■□□□□ 0.01
Trerf1Q8BXJ2 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trerf1Q8BXJ2 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trerf1Q8BXJ2 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trerf1Q8BXJ2 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trerf1Q8BXJ2 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Trerf1Q8BXJ2 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trerf1Q8BXJ2 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trerf1Q8BXJ2 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trerf1Q8BXJ2 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trerf1Q8BXJ2 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC15.12■□□□□ 0.01
Trerf1Q8BXJ2 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trerf1Q8BXJ2 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trerf1Q8BXJ2 Gm16026-204ENSMUST00000162652 683 ntBASIC15.12■□□□□ 0.01
Trerf1Q8BXJ2 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC15.12■□□□□ 0.01
Trerf1Q8BXJ2 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC15.12■□□□□ 0.01
Trerf1Q8BXJ2 AC124549.3-201ENSMUST00000225541 367 ntBASIC15.12■□□□□ 0.01
Trerf1Q8BXJ2 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC15.12■□□□□ 0.01
Trerf1Q8BXJ2 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trerf1Q8BXJ2 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Trerf1Q8BXJ2 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC15.12■□□□□ 0.01
Trerf1Q8BXJ2 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Trerf1Q8BXJ2 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Trerf1Q8BXJ2 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trerf1Q8BXJ2 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trerf1Q8BXJ2 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trerf1Q8BXJ2 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trerf1Q8BXJ2 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC15.12■□□□□ 0.01
Trerf1Q8BXJ2 Gm21009-201ENSMUST00000197169 1669 ntBASIC15.12■□□□□ 0.01
Trerf1Q8BXJ2 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trerf1Q8BXJ2 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trerf1Q8BXJ2 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trerf1Q8BXJ2 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trerf1Q8BXJ2 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC15.11■□□□□ 0.01
Trerf1Q8BXJ2 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Trerf1Q8BXJ2 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC15.11■□□□□ 0.01
Trerf1Q8BXJ2 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trerf1Q8BXJ2 AC131743.5-201ENSMUST00000220775 1618 ntBASIC15.11■□□□□ 0.01
Trerf1Q8BXJ2 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trerf1Q8BXJ2 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trerf1Q8BXJ2 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Trerf1Q8BXJ2 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trerf1Q8BXJ2 Gm4780-202ENSMUST00000215200 2644 ntBASIC15.11■□□□□ 0.01
Trerf1Q8BXJ2 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trerf1Q8BXJ2 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Trerf1Q8BXJ2 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC15.11■□□□□ 0.01
Trerf1Q8BXJ2 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC15.11■□□□□ 0.01
Trerf1Q8BXJ2 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC15.11■□□□□ 0.01
Trerf1Q8BXJ2 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trerf1Q8BXJ2 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC15.11■□□□□ 0.01
Trerf1Q8BXJ2 Gm8597-201ENSMUST00000191525 1109 ntBASIC15.11■□□□□ 0.01
Trerf1Q8BXJ2 Chchd1-203ENSMUST00000224633 557 ntBASIC15.11■□□□□ 0.01
Trerf1Q8BXJ2 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trerf1Q8BXJ2 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trerf1Q8BXJ2 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trerf1Q8BXJ2 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trerf1Q8BXJ2 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trerf1Q8BXJ2 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trerf1Q8BXJ2 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC15.11■□□□□ 0.01
Trerf1Q8BXJ2 Gm11960-202ENSMUST00000181063 2858 ntBASIC15.11■□□□□ 0.01
Trerf1Q8BXJ2 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trerf1Q8BXJ2 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trerf1Q8BXJ2 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trerf1Q8BXJ2 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trerf1Q8BXJ2 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trerf1Q8BXJ2 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trerf1Q8BXJ2 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trerf1Q8BXJ2 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trerf1Q8BXJ2 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trerf1Q8BXJ2 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trerf1Q8BXJ2 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trerf1Q8BXJ2 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trerf1Q8BXJ2 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trerf1Q8BXJ2 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trerf1Q8BXJ2 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trerf1Q8BXJ2 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trerf1Q8BXJ2 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC15.1■□□□□ 0.01
Trerf1Q8BXJ2 Mir1895-201ENSMUST00000122615 79 ntBASIC15.1■□□□□ 0.01
Trerf1Q8BXJ2 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms