Protein–RNA interactions for Protein: Q8BX13

Ube3d, E3 ubiquitin-protein ligase E3D, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3dQ8BX13 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Ube3dQ8BX13 Gm44981-201ENSMUST00000205549 1943 ntBASIC12.73□□□□□ -0.37
Ube3dQ8BX13 Gm6973-201ENSMUST00000117080 721 ntBASIC12.73□□□□□ -0.37
Ube3dQ8BX13 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC12.73□□□□□ -0.37
Ube3dQ8BX13 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC12.73□□□□□ -0.37
Ube3dQ8BX13 Mir6956-201ENSMUST00000183598 62 ntBASIC12.73□□□□□ -0.37
Ube3dQ8BX13 Gm44872-201ENSMUST00000207864 420 ntBASIC12.73□□□□□ -0.37
Ube3dQ8BX13 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ube3dQ8BX13 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Ube3dQ8BX13 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC12.73□□□□□ -0.37
Ube3dQ8BX13 Gm15823-201ENSMUST00000064305 670 ntBASIC12.73□□□□□ -0.37
Ube3dQ8BX13 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Ube3dQ8BX13 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Ube3dQ8BX13 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC12.73□□□□□ -0.37
Ube3dQ8BX13 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Ube3dQ8BX13 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ube3dQ8BX13 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Ube3dQ8BX13 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ube3dQ8BX13 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ube3dQ8BX13 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ube3dQ8BX13 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Ube3dQ8BX13 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ube3dQ8BX13 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ube3dQ8BX13 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ube3dQ8BX13 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ube3dQ8BX13 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ube3dQ8BX13 CT025626.1-201ENSMUST00000223735 1455 ntBASIC12.72□□□□□ -0.37
Ube3dQ8BX13 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ube3dQ8BX13 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ube3dQ8BX13 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ube3dQ8BX13 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ube3dQ8BX13 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ube3dQ8BX13 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ube3dQ8BX13 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ube3dQ8BX13 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ube3dQ8BX13 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ube3dQ8BX13 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ube3dQ8BX13 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC12.72□□□□□ -0.37
Ube3dQ8BX13 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ube3dQ8BX13 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Ube3dQ8BX13 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ube3dQ8BX13 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ube3dQ8BX13 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ube3dQ8BX13 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ube3dQ8BX13 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ube3dQ8BX13 Gm15593-201ENSMUST00000122085 1008 ntBASIC12.72□□□□□ -0.37
Ube3dQ8BX13 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC12.72□□□□□ -0.37
Ube3dQ8BX13 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ube3dQ8BX13 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC12.72□□□□□ -0.37
Ube3dQ8BX13 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ube3dQ8BX13 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ube3dQ8BX13 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC12.72□□□□□ -0.37
Ube3dQ8BX13 AC164567.1-201ENSMUST00000219185 960 ntBASIC12.72□□□□□ -0.37
Ube3dQ8BX13 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ube3dQ8BX13 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ube3dQ8BX13 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Ube3dQ8BX13 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ube3dQ8BX13 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ube3dQ8BX13 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ube3dQ8BX13 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
Ube3dQ8BX13 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ube3dQ8BX13 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ube3dQ8BX13 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ube3dQ8BX13 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ube3dQ8BX13 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ube3dQ8BX13 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ube3dQ8BX13 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ube3dQ8BX13 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ube3dQ8BX13 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC12.72□□□□□ -0.37
Ube3dQ8BX13 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ube3dQ8BX13 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ube3dQ8BX13 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ube3dQ8BX13 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ube3dQ8BX13 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ube3dQ8BX13 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ube3dQ8BX13 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Ube3dQ8BX13 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ube3dQ8BX13 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ube3dQ8BX13 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ube3dQ8BX13 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ube3dQ8BX13 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Ube3dQ8BX13 Gm13857-203ENSMUST00000150561 2337 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ube3dQ8BX13 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ube3dQ8BX13 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC12.71□□□□□ -0.37
Ube3dQ8BX13 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ube3dQ8BX13 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ube3dQ8BX13 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ube3dQ8BX13 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ube3dQ8BX13 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ube3dQ8BX13 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC12.71□□□□□ -0.37
Ube3dQ8BX13 Gm11543-201ENSMUST00000120758 370 ntBASIC12.71□□□□□ -0.37
Ube3dQ8BX13 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC12.71□□□□□ -0.37
Ube3dQ8BX13 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ube3dQ8BX13 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Ube3dQ8BX13 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC12.71□□□□□ -0.37
Ube3dQ8BX13 Auts2-212ENSMUST00000178555 309 ntBASIC12.71□□□□□ -0.37
Ube3dQ8BX13 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC12.71□□□□□ -0.37
Ube3dQ8BX13 Gm8597-201ENSMUST00000191525 1109 ntBASIC12.71□□□□□ -0.37
Ube3dQ8BX13 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC12.71□□□□□ -0.37
Ube3dQ8BX13 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms