Protein–RNA interactions for Protein: Q8BWU1

Sprn, Shadow of prion protein, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SprnQ8BWU1 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
SprnQ8BWU1 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SprnQ8BWU1 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SprnQ8BWU1 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC12.63□□□□□ -0.39
SprnQ8BWU1 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
SprnQ8BWU1 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SprnQ8BWU1 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
SprnQ8BWU1 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
SprnQ8BWU1 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SprnQ8BWU1 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC12.63□□□□□ -0.39
SprnQ8BWU1 Gm37230-201ENSMUST00000194491 818 ntBASIC12.63□□□□□ -0.39
SprnQ8BWU1 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC12.63□□□□□ -0.39
SprnQ8BWU1 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC12.63□□□□□ -0.39
SprnQ8BWU1 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SprnQ8BWU1 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SprnQ8BWU1 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
SprnQ8BWU1 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
SprnQ8BWU1 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
SprnQ8BWU1 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SprnQ8BWU1 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SprnQ8BWU1 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SprnQ8BWU1 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SprnQ8BWU1 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC12.63□□□□□ -0.39
SprnQ8BWU1 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
SprnQ8BWU1 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SprnQ8BWU1 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SprnQ8BWU1 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
SprnQ8BWU1 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SprnQ8BWU1 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SprnQ8BWU1 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SprnQ8BWU1 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SprnQ8BWU1 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SprnQ8BWU1 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC12.62□□□□□ -0.39
SprnQ8BWU1 Acot6-202ENSMUST00000222921 3622 ntBASIC12.62□□□□□ -0.39
SprnQ8BWU1 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SprnQ8BWU1 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
SprnQ8BWU1 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
SprnQ8BWU1 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SprnQ8BWU1 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
SprnQ8BWU1 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SprnQ8BWU1 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SprnQ8BWU1 Gm10729-202ENSMUST00000193403 1375 ntBASIC12.62□□□□□ -0.39
SprnQ8BWU1 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
SprnQ8BWU1 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SprnQ8BWU1 Gm15467-201ENSMUST00000120582 445 ntBASIC12.62□□□□□ -0.39
SprnQ8BWU1 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SprnQ8BWU1 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC12.62□□□□□ -0.39
SprnQ8BWU1 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SprnQ8BWU1 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC12.62□□□□□ -0.39
SprnQ8BWU1 Gm43935-201ENSMUST00000203569 1050 ntBASIC12.62□□□□□ -0.39
SprnQ8BWU1 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SprnQ8BWU1 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SprnQ8BWU1 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC12.62□□□□□ -0.39
SprnQ8BWU1 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SprnQ8BWU1 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SprnQ8BWU1 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SprnQ8BWU1 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
SprnQ8BWU1 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SprnQ8BWU1 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SprnQ8BWU1 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SprnQ8BWU1 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
SprnQ8BWU1 Gm37795-201ENSMUST00000194216 2459 ntBASIC12.62□□□□□ -0.39
SprnQ8BWU1 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SprnQ8BWU1 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SprnQ8BWU1 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SprnQ8BWU1 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SprnQ8BWU1 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC12.62□□□□□ -0.39
SprnQ8BWU1 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
SprnQ8BWU1 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
SprnQ8BWU1 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SprnQ8BWU1 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SprnQ8BWU1 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SprnQ8BWU1 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
SprnQ8BWU1 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SprnQ8BWU1 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SprnQ8BWU1 Gm37133-201ENSMUST00000192705 1922 ntBASIC12.61□□□□□ -0.39
SprnQ8BWU1 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SprnQ8BWU1 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SprnQ8BWU1 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SprnQ8BWU1 Gm7222-201ENSMUST00000117512 906 ntBASIC12.61□□□□□ -0.39
SprnQ8BWU1 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SprnQ8BWU1 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC12.61□□□□□ -0.39
SprnQ8BWU1 Gm6944-201ENSMUST00000182449 1006 ntBASIC12.61□□□□□ -0.39
SprnQ8BWU1 Gm43073-201ENSMUST00000198200 1189 ntBASIC12.61□□□□□ -0.39
SprnQ8BWU1 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SprnQ8BWU1 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SprnQ8BWU1 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SprnQ8BWU1 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SprnQ8BWU1 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SprnQ8BWU1 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
SprnQ8BWU1 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
SprnQ8BWU1 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
SprnQ8BWU1 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
SprnQ8BWU1 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SprnQ8BWU1 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SprnQ8BWU1 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
SprnQ8BWU1 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
SprnQ8BWU1 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
SprnQ8BWU1 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SprnQ8BWU1 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms