Protein–RNA interactions for Protein: Q8BTV2

Cpsf7, Cleavage and polyadenylation specificity factor subunit 7, mousemouse

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf7Q8BTV2 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cpsf7Q8BTV2 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Cpsf7Q8BTV2 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC14.34□□□□□ -0.11
Cpsf7Q8BTV2 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cpsf7Q8BTV2 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cpsf7Q8BTV2 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cpsf7Q8BTV2 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cpsf7Q8BTV2 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cpsf7Q8BTV2 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cpsf7Q8BTV2 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cpsf7Q8BTV2 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cpsf7Q8BTV2 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cpsf7Q8BTV2 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cpsf7Q8BTV2 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Cpsf7Q8BTV2 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cpsf7Q8BTV2 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cpsf7Q8BTV2 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Cpsf7Q8BTV2 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cpsf7Q8BTV2 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cpsf7Q8BTV2 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cpsf7Q8BTV2 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cpsf7Q8BTV2 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cpsf7Q8BTV2 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cpsf7Q8BTV2 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cpsf7Q8BTV2 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cpsf7Q8BTV2 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cpsf7Q8BTV2 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cpsf7Q8BTV2 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cpsf7Q8BTV2 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cpsf7Q8BTV2 Gm7222-201ENSMUST00000117512 906 ntBASIC14.33□□□□□ -0.12
Cpsf7Q8BTV2 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC14.33□□□□□ -0.12
Cpsf7Q8BTV2 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cpsf7Q8BTV2 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Cpsf7Q8BTV2 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Cpsf7Q8BTV2 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cpsf7Q8BTV2 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cpsf7Q8BTV2 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cpsf7Q8BTV2 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cpsf7Q8BTV2 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cpsf7Q8BTV2 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cpsf7Q8BTV2 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cpsf7Q8BTV2 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cpsf7Q8BTV2 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cpsf7Q8BTV2 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cpsf7Q8BTV2 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cpsf7Q8BTV2 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cpsf7Q8BTV2 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cpsf7Q8BTV2 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cpsf7Q8BTV2 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cpsf7Q8BTV2 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cpsf7Q8BTV2 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cpsf7Q8BTV2 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cpsf7Q8BTV2 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC14.32□□□□□ -0.12
Cpsf7Q8BTV2 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cpsf7Q8BTV2 AC164565.1-201ENSMUST00000217520 1484 ntBASIC14.32□□□□□ -0.12
Cpsf7Q8BTV2 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cpsf7Q8BTV2 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC14.32□□□□□ -0.12
Cpsf7Q8BTV2 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cpsf7Q8BTV2 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cpsf7Q8BTV2 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Cpsf7Q8BTV2 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cpsf7Q8BTV2 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cpsf7Q8BTV2 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cpsf7Q8BTV2 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cpsf7Q8BTV2 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Cpsf7Q8BTV2 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cpsf7Q8BTV2 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Cpsf7Q8BTV2 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Cpsf7Q8BTV2 Gm8597-201ENSMUST00000191525 1109 ntBASIC14.32□□□□□ -0.12
Cpsf7Q8BTV2 Gm18206-201ENSMUST00000207027 926 ntBASIC14.32□□□□□ -0.12
Cpsf7Q8BTV2 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC14.32□□□□□ -0.12
Cpsf7Q8BTV2 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cpsf7Q8BTV2 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC14.32□□□□□ -0.12
Cpsf7Q8BTV2 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cpsf7Q8BTV2 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Cpsf7Q8BTV2 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Cpsf7Q8BTV2 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cpsf7Q8BTV2 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cpsf7Q8BTV2 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC14.32□□□□□ -0.12
Cpsf7Q8BTV2 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cpsf7Q8BTV2 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Cpsf7Q8BTV2 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Cpsf7Q8BTV2 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cpsf7Q8BTV2 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cpsf7Q8BTV2 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cpsf7Q8BTV2 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cpsf7Q8BTV2 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cpsf7Q8BTV2 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC14.31□□□□□ -0.12
Cpsf7Q8BTV2 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cpsf7Q8BTV2 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cpsf7Q8BTV2 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cpsf7Q8BTV2 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cpsf7Q8BTV2 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cpsf7Q8BTV2 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cpsf7Q8BTV2 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC14.31□□□□□ -0.12
Cpsf7Q8BTV2 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cpsf7Q8BTV2 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cpsf7Q8BTV2 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cpsf7Q8BTV2 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cpsf7Q8BTV2 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 82.8 ms