Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Gm6944-201ENSMUST00000182449 1006 ntBASIC14.68□□□□□ -0.06
Chmp2bQ8BJF9 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Chmp2bQ8BJF9 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC14.68□□□□□ -0.06
Chmp2bQ8BJF9 Gm2272-201ENSMUST00000194903 582 ntBASIC14.68□□□□□ -0.06
Chmp2bQ8BJF9 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC14.68□□□□□ -0.06
Chmp2bQ8BJF9 AC084391.1-201ENSMUST00000200651 141 ntBASIC14.68□□□□□ -0.06
Chmp2bQ8BJF9 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Chmp2bQ8BJF9 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC14.68□□□□□ -0.06
Chmp2bQ8BJF9 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Chmp2bQ8BJF9 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Chmp2bQ8BJF9 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Chmp2bQ8BJF9 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Chmp2bQ8BJF9 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
Chmp2bQ8BJF9 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC14.68□□□□□ -0.06
Chmp2bQ8BJF9 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Chmp2bQ8BJF9 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Chmp2bQ8BJF9 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Chmp2bQ8BJF9 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Chmp2bQ8BJF9 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Chmp2bQ8BJF9 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Chmp2bQ8BJF9 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Chmp2bQ8BJF9 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
Chmp2bQ8BJF9 Gm43364-201ENSMUST00000196046 3274 ntBASIC14.67□□□□□ -0.06
Chmp2bQ8BJF9 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Chmp2bQ8BJF9 Gm37411-201ENSMUST00000194180 2282 ntBASIC14.67□□□□□ -0.06
Chmp2bQ8BJF9 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Chmp2bQ8BJF9 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC14.67□□□□□ -0.06
Chmp2bQ8BJF9 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Chmp2bQ8BJF9 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Chmp2bQ8BJF9 Gm16026-204ENSMUST00000162652 683 ntBASIC14.67□□□□□ -0.06
Chmp2bQ8BJF9 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC14.67□□□□□ -0.06
Chmp2bQ8BJF9 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC14.67□□□□□ -0.06
Chmp2bQ8BJF9 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Chmp2bQ8BJF9 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC14.67□□□□□ -0.06
Chmp2bQ8BJF9 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC14.67□□□□□ -0.06
Chmp2bQ8BJF9 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Chmp2bQ8BJF9 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC14.67□□□□□ -0.06
Chmp2bQ8BJF9 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Chmp2bQ8BJF9 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Chmp2bQ8BJF9 Gm42471-201ENSMUST00000201457 1865 ntBASIC14.67□□□□□ -0.06
Chmp2bQ8BJF9 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Chmp2bQ8BJF9 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Chmp2bQ8BJF9 Pcgf5-211ENSMUST00000225920 6443 ntBASIC14.67□□□□□ -0.06
Chmp2bQ8BJF9 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Chmp2bQ8BJF9 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Chmp2bQ8BJF9 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Chmp2bQ8BJF9 Gm9252-201ENSMUST00000172364 1602 ntBASIC14.66□□□□□ -0.06
Chmp2bQ8BJF9 Ssr1-204ENSMUST00000225319 1610 ntBASIC14.66□□□□□ -0.06
Chmp2bQ8BJF9 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Chmp2bQ8BJF9 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Chmp2bQ8BJF9 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Chmp2bQ8BJF9 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Chmp2bQ8BJF9 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Chmp2bQ8BJF9 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC14.66□□□□□ -0.06
Chmp2bQ8BJF9 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Chmp2bQ8BJF9 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Chmp2bQ8BJF9 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Chmp2bQ8BJF9 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC14.66□□□□□ -0.06
Chmp2bQ8BJF9 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC14.66□□□□□ -0.06
Chmp2bQ8BJF9 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Chmp2bQ8BJF9 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Chmp2bQ8BJF9 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Chmp2bQ8BJF9 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Chmp2bQ8BJF9 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Chmp2bQ8BJF9 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Chmp2bQ8BJF9 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC14.66□□□□□ -0.06
Chmp2bQ8BJF9 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Chmp2bQ8BJF9 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Chmp2bQ8BJF9 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC14.66□□□□□ -0.06
Chmp2bQ8BJF9 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC14.66□□□□□ -0.06
Chmp2bQ8BJF9 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Chmp2bQ8BJF9 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Chmp2bQ8BJF9 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Chmp2bQ8BJF9 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Chmp2bQ8BJF9 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Chmp2bQ8BJF9 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Chmp2bQ8BJF9 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Chmp2bQ8BJF9 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Chmp2bQ8BJF9 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Chmp2bQ8BJF9 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Chmp2bQ8BJF9 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Chmp2bQ8BJF9 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Chmp2bQ8BJF9 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Chmp2bQ8BJF9 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Chmp2bQ8BJF9 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Chmp2bQ8BJF9 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Chmp2bQ8BJF9 AC154527.4-201ENSMUST00000224364 1667 ntBASIC14.65□□□□□ -0.06
Chmp2bQ8BJF9 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Chmp2bQ8BJF9 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Chmp2bQ8BJF9 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Chmp2bQ8BJF9 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Chmp2bQ8BJF9 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Chmp2bQ8BJF9 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Chmp2bQ8BJF9 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Chmp2bQ8BJF9 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC14.65□□□□□ -0.06
Chmp2bQ8BJF9 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC14.65□□□□□ -0.06
Chmp2bQ8BJF9 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC14.65□□□□□ -0.06
Chmp2bQ8BJF9 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Chmp2bQ8BJF9 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Chmp2bQ8BJF9 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms