Protein–RNA interactions for Protein: Q8BI41

Synb, Syncytin-B, mousemouse

Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynbQ8BI41 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
SynbQ8BI41 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SynbQ8BI41 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
SynbQ8BI41 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
SynbQ8BI41 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC13.7□□□□□ -0.22
SynbQ8BI41 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC13.7□□□□□ -0.22
SynbQ8BI41 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
SynbQ8BI41 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SynbQ8BI41 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SynbQ8BI41 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SynbQ8BI41 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SynbQ8BI41 Gm15593-201ENSMUST00000122085 1008 ntBASIC13.7□□□□□ -0.22
SynbQ8BI41 Gm27680-201ENSMUST00000184192 160 ntBASIC13.7□□□□□ -0.22
SynbQ8BI41 Gm43438-201ENSMUST00000198133 379 ntBASIC13.7□□□□□ -0.22
SynbQ8BI41 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
SynbQ8BI41 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SynbQ8BI41 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SynbQ8BI41 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SynbQ8BI41 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SynbQ8BI41 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SynbQ8BI41 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SynbQ8BI41 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
SynbQ8BI41 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
SynbQ8BI41 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC13.7□□□□□ -0.22
SynbQ8BI41 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC13.7□□□□□ -0.22
SynbQ8BI41 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SynbQ8BI41 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SynbQ8BI41 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SynbQ8BI41 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SynbQ8BI41 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC13.69□□□□□ -0.22
SynbQ8BI41 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
SynbQ8BI41 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
SynbQ8BI41 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SynbQ8BI41 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC13.69□□□□□ -0.22
SynbQ8BI41 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
SynbQ8BI41 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SynbQ8BI41 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC13.69□□□□□ -0.22
SynbQ8BI41 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SynbQ8BI41 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
SynbQ8BI41 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
SynbQ8BI41 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
SynbQ8BI41 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SynbQ8BI41 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SynbQ8BI41 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SynbQ8BI41 Gm7488-201ENSMUST00000117148 684 ntBASIC13.69□□□□□ -0.22
SynbQ8BI41 Gm6539-201ENSMUST00000119157 1064 ntBASIC13.69□□□□□ -0.22
SynbQ8BI41 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
SynbQ8BI41 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
SynbQ8BI41 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
SynbQ8BI41 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC13.69□□□□□ -0.22
SynbQ8BI41 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC13.69□□□□□ -0.22
SynbQ8BI41 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SynbQ8BI41 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
SynbQ8BI41 Gm18766-201ENSMUST00000189811 808 ntBASIC13.69□□□□□ -0.22
SynbQ8BI41 Gtpbp10-211ENSMUST00000198799 648 ntBASIC13.69□□□□□ -0.22
SynbQ8BI41 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC13.69□□□□□ -0.22
SynbQ8BI41 Gm9063-201ENSMUST00000223299 582 ntBASIC13.69□□□□□ -0.22
SynbQ8BI41 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SynbQ8BI41 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SynbQ8BI41 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
SynbQ8BI41 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SynbQ8BI41 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SynbQ8BI41 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
SynbQ8BI41 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
SynbQ8BI41 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SynbQ8BI41 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SynbQ8BI41 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SynbQ8BI41 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SynbQ8BI41 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
SynbQ8BI41 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC13.69□□□□□ -0.22
SynbQ8BI41 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SynbQ8BI41 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SynbQ8BI41 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
SynbQ8BI41 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SynbQ8BI41 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SynbQ8BI41 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
SynbQ8BI41 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SynbQ8BI41 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
SynbQ8BI41 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
SynbQ8BI41 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SynbQ8BI41 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SynbQ8BI41 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
SynbQ8BI41 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SynbQ8BI41 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
SynbQ8BI41 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SynbQ8BI41 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SynbQ8BI41 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
SynbQ8BI41 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SynbQ8BI41 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SynbQ8BI41 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
SynbQ8BI41 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
SynbQ8BI41 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SynbQ8BI41 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC13.68□□□□□ -0.22
SynbQ8BI41 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SynbQ8BI41 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SynbQ8BI41 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SynbQ8BI41 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC13.68□□□□□ -0.22
SynbQ8BI41 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC13.68□□□□□ -0.22
SynbQ8BI41 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC13.68□□□□□ -0.22
SynbQ8BI41 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms