Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trnp1Q80ZI1 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Trnp1Q80ZI1 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Trnp1Q80ZI1 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Trnp1Q80ZI1 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Trnp1Q80ZI1 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trnp1Q80ZI1 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trnp1Q80ZI1 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trnp1Q80ZI1 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trnp1Q80ZI1 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Trnp1Q80ZI1 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Trnp1Q80ZI1 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trnp1Q80ZI1 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Trnp1Q80ZI1 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trnp1Q80ZI1 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Trnp1Q80ZI1 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC15.98■□□□□ 0.15
Trnp1Q80ZI1 Gm27243-201ENSMUST00000183964 521 ntBASIC15.98■□□□□ 0.15
Trnp1Q80ZI1 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Trnp1Q80ZI1 CT485787.1-201ENSMUST00000225617 968 ntBASIC15.98■□□□□ 0.15
Trnp1Q80ZI1 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trnp1Q80ZI1 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trnp1Q80ZI1 Gm9823-201ENSMUST00000051212 327 ntBASIC15.98■□□□□ 0.15
Trnp1Q80ZI1 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trnp1Q80ZI1 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Trnp1Q80ZI1 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Trnp1Q80ZI1 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Trnp1Q80ZI1 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Trnp1Q80ZI1 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trnp1Q80ZI1 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trnp1Q80ZI1 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trnp1Q80ZI1 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trnp1Q80ZI1 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trnp1Q80ZI1 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trnp1Q80ZI1 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trnp1Q80ZI1 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trnp1Q80ZI1 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC15.98■□□□□ 0.15
Trnp1Q80ZI1 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trnp1Q80ZI1 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trnp1Q80ZI1 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Trnp1Q80ZI1 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC15.97■□□□□ 0.15
Trnp1Q80ZI1 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trnp1Q80ZI1 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trnp1Q80ZI1 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trnp1Q80ZI1 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trnp1Q80ZI1 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trnp1Q80ZI1 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC15.97■□□□□ 0.15
Trnp1Q80ZI1 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trnp1Q80ZI1 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trnp1Q80ZI1 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Trnp1Q80ZI1 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trnp1Q80ZI1 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Trnp1Q80ZI1 Gm9109-201ENSMUST00000120254 1405 ntBASIC15.97■□□□□ 0.15
Trnp1Q80ZI1 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trnp1Q80ZI1 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trnp1Q80ZI1 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Trnp1Q80ZI1 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Trnp1Q80ZI1 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Trnp1Q80ZI1 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trnp1Q80ZI1 Gm15236-201ENSMUST00000117309 379 ntBASIC15.97■□□□□ 0.15
Trnp1Q80ZI1 Gm14730-201ENSMUST00000122378 1045 ntBASIC15.97■□□□□ 0.15
Trnp1Q80ZI1 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trnp1Q80ZI1 Gm8810-201ENSMUST00000172895 754 ntBASIC15.97■□□□□ 0.15
Trnp1Q80ZI1 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC15.97■□□□□ 0.15
Trnp1Q80ZI1 Gm27331-201ENSMUST00000183705 60 ntBASIC15.97■□□□□ 0.15
Trnp1Q80ZI1 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC15.97■□□□□ 0.15
Trnp1Q80ZI1 Gm7498-201ENSMUST00000203282 1084 ntBASIC15.97■□□□□ 0.15
Trnp1Q80ZI1 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trnp1Q80ZI1 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trnp1Q80ZI1 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trnp1Q80ZI1 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trnp1Q80ZI1 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trnp1Q80ZI1 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC15.97■□□□□ 0.15
Trnp1Q80ZI1 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trnp1Q80ZI1 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC15.97■□□□□ 0.15
Trnp1Q80ZI1 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Trnp1Q80ZI1 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC15.97■□□□□ 0.15
Trnp1Q80ZI1 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trnp1Q80ZI1 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Trnp1Q80ZI1 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trnp1Q80ZI1 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Trnp1Q80ZI1 Gm42471-201ENSMUST00000201457 1865 ntBASIC15.97■□□□□ 0.15
Trnp1Q80ZI1 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC15.97■□□□□ 0.15
Trnp1Q80ZI1 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trnp1Q80ZI1 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC15.96■□□□□ 0.15
Trnp1Q80ZI1 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Trnp1Q80ZI1 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Trnp1Q80ZI1 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trnp1Q80ZI1 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trnp1Q80ZI1 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
Trnp1Q80ZI1 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trnp1Q80ZI1 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC15.96■□□□□ 0.15
Trnp1Q80ZI1 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trnp1Q80ZI1 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trnp1Q80ZI1 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC15.96■□□□□ 0.15
Trnp1Q80ZI1 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Trnp1Q80ZI1 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trnp1Q80ZI1 Proscos-202ENSMUST00000178990 666 ntBASIC15.96■□□□□ 0.15
Trnp1Q80ZI1 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
Trnp1Q80ZI1 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC15.96■□□□□ 0.15
Trnp1Q80ZI1 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC15.96■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 79.6 ms