Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdh19Q80TF3 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdh19Q80TF3 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdh19Q80TF3 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdh19Q80TF3 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdh19Q80TF3 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdh19Q80TF3 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Pcdh19Q80TF3 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdh19Q80TF3 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdh19Q80TF3 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdh19Q80TF3 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdh19Q80TF3 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Pcdh19Q80TF3 Arhgef33-209ENSMUST00000225223 714 ntBASIC14.04□□□□□ -0.16
Pcdh19Q80TF3 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdh19Q80TF3 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC14.04□□□□□ -0.16
Pcdh19Q80TF3 Syt7-204ENSMUST00000223586 1344 ntBASIC14.04□□□□□ -0.16
Pcdh19Q80TF3 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdh19Q80TF3 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdh19Q80TF3 Gm3365-201ENSMUST00000216296 1480 ntBASIC14.04□□□□□ -0.16
Pcdh19Q80TF3 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdh19Q80TF3 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdh19Q80TF3 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC14.04□□□□□ -0.16
Pcdh19Q80TF3 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdh19Q80TF3 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdh19Q80TF3 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Pcdh19Q80TF3 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdh19Q80TF3 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdh19Q80TF3 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC14.03□□□□□ -0.16
Pcdh19Q80TF3 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdh19Q80TF3 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdh19Q80TF3 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdh19Q80TF3 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdh19Q80TF3 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdh19Q80TF3 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdh19Q80TF3 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdh19Q80TF3 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC14.03□□□□□ -0.16
Pcdh19Q80TF3 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Pcdh19Q80TF3 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
Pcdh19Q80TF3 Cd63-ps-201ENSMUST00000145417 875 ntBASIC14.03□□□□□ -0.16
Pcdh19Q80TF3 Gm23547-201ENSMUST00000158210 271 ntBASIC14.03□□□□□ -0.16
Pcdh19Q80TF3 Gm16215-201ENSMUST00000161990 637 ntBASIC14.03□□□□□ -0.16
Pcdh19Q80TF3 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdh19Q80TF3 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdh19Q80TF3 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Pcdh19Q80TF3 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdh19Q80TF3 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdh19Q80TF3 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdh19Q80TF3 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Pcdh19Q80TF3 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdh19Q80TF3 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdh19Q80TF3 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdh19Q80TF3 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Pcdh19Q80TF3 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC14.03□□□□□ -0.16
Pcdh19Q80TF3 Camk2g-217ENSMUST00000226630 1937 ntBASIC14.03□□□□□ -0.16
Pcdh19Q80TF3 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdh19Q80TF3 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdh19Q80TF3 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC14.03□□□□□ -0.16
Pcdh19Q80TF3 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdh19Q80TF3 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdh19Q80TF3 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdh19Q80TF3 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdh19Q80TF3 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC14.03□□□□□ -0.16
Pcdh19Q80TF3 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdh19Q80TF3 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdh19Q80TF3 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdh19Q80TF3 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdh19Q80TF3 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdh19Q80TF3 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdh19Q80TF3 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdh19Q80TF3 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdh19Q80TF3 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdh19Q80TF3 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdh19Q80TF3 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Pcdh19Q80TF3 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdh19Q80TF3 BC001981-202ENSMUST00000191393 1545 ntBASIC14.02□□□□□ -0.16
Pcdh19Q80TF3 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdh19Q80TF3 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC14.02□□□□□ -0.17
Pcdh19Q80TF3 Gm4875-201ENSMUST00000118257 786 ntBASIC14.02□□□□□ -0.17
Pcdh19Q80TF3 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdh19Q80TF3 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
Pcdh19Q80TF3 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Pcdh19Q80TF3 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdh19Q80TF3 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Pcdh19Q80TF3 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdh19Q80TF3 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdh19Q80TF3 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdh19Q80TF3 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Pcdh19Q80TF3 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdh19Q80TF3 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdh19Q80TF3 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC14.01□□□□□ -0.17
Pcdh19Q80TF3 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
Pcdh19Q80TF3 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdh19Q80TF3 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdh19Q80TF3 Gm24694-201ENSMUST00000180054 110 ntBASIC14.01□□□□□ -0.17
Pcdh19Q80TF3 Gm27663-201ENSMUST00000184839 110 ntBASIC14.01□□□□□ -0.17
Pcdh19Q80TF3 Gm43703-201ENSMUST00000200523 763 ntBASIC14.01□□□□□ -0.17
Pcdh19Q80TF3 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdh19Q80TF3 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Pcdh19Q80TF3 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC14.01□□□□□ -0.17
Pcdh19Q80TF3 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms