Protein–RNA interactions for Protein: Q7TNM2

Trim46, Tripartite motif-containing protein 46, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim46Q7TNM2 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trim46Q7TNM2 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim46Q7TNM2 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Trim46Q7TNM2 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim46Q7TNM2 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Trim46Q7TNM2 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trim46Q7TNM2 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim46Q7TNM2 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim46Q7TNM2 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim46Q7TNM2 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC13.43□□□□□ -0.26
Trim46Q7TNM2 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim46Q7TNM2 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim46Q7TNM2 Gm42466-201ENSMUST00000202099 1301 ntBASIC13.43□□□□□ -0.26
Trim46Q7TNM2 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim46Q7TNM2 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Trim46Q7TNM2 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim46Q7TNM2 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim46Q7TNM2 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC13.43□□□□□ -0.26
Trim46Q7TNM2 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Trim46Q7TNM2 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trim46Q7TNM2 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim46Q7TNM2 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim46Q7TNM2 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim46Q7TNM2 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim46Q7TNM2 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim46Q7TNM2 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC13.43□□□□□ -0.26
Trim46Q7TNM2 Gm13365-201ENSMUST00000121188 973 ntBASIC13.43□□□□□ -0.26
Trim46Q7TNM2 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC13.43□□□□□ -0.26
Trim46Q7TNM2 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim46Q7TNM2 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim46Q7TNM2 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC13.43□□□□□ -0.26
Trim46Q7TNM2 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC13.43□□□□□ -0.26
Trim46Q7TNM2 Ighv8-7-201ENSMUST00000194349 297 ntBASIC13.43□□□□□ -0.26
Trim46Q7TNM2 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim46Q7TNM2 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Trim46Q7TNM2 CT943659.1-201ENSMUST00000215459 326 ntBASIC13.43□□□□□ -0.26
Trim46Q7TNM2 AC158529.1-201ENSMUST00000223618 239 ntBASIC13.43□□□□□ -0.26
Trim46Q7TNM2 AC124549.3-201ENSMUST00000225541 367 ntBASIC13.43□□□□□ -0.26
Trim46Q7TNM2 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim46Q7TNM2 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim46Q7TNM2 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trim46Q7TNM2 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim46Q7TNM2 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trim46Q7TNM2 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim46Q7TNM2 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trim46Q7TNM2 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trim46Q7TNM2 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim46Q7TNM2 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC13.43□□□□□ -0.26
Trim46Q7TNM2 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC13.43□□□□□ -0.26
Trim46Q7TNM2 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim46Q7TNM2 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim46Q7TNM2 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim46Q7TNM2 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim46Q7TNM2 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trim46Q7TNM2 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trim46Q7TNM2 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim46Q7TNM2 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Trim46Q7TNM2 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim46Q7TNM2 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim46Q7TNM2 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trim46Q7TNM2 Gm6018-201ENSMUST00000216090 1306 ntBASIC13.42□□□□□ -0.26
Trim46Q7TNM2 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trim46Q7TNM2 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trim46Q7TNM2 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Trim46Q7TNM2 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim46Q7TNM2 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim46Q7TNM2 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC13.42□□□□□ -0.26
Trim46Q7TNM2 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim46Q7TNM2 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim46Q7TNM2 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim46Q7TNM2 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Trim46Q7TNM2 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim46Q7TNM2 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim46Q7TNM2 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC13.42□□□□□ -0.26
Trim46Q7TNM2 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim46Q7TNM2 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC13.42□□□□□ -0.26
Trim46Q7TNM2 Gm18889-201ENSMUST00000174284 929 ntBASIC13.42□□□□□ -0.26
Trim46Q7TNM2 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC13.42□□□□□ -0.26
Trim46Q7TNM2 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Trim46Q7TNM2 Gm43416-201ENSMUST00000201916 1015 ntBASIC13.42□□□□□ -0.26
Trim46Q7TNM2 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC13.42□□□□□ -0.26
Trim46Q7TNM2 Gm45609-206ENSMUST00000210176 1023 ntTSL 5 BASIC13.42□□□□□ -0.26
Trim46Q7TNM2 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC13.42□□□□□ -0.26
Trim46Q7TNM2 AC225888.1-201ENSMUST00000227184 728 ntBASIC13.42□□□□□ -0.26
Trim46Q7TNM2 A430010J10Rik-201ENSMUST00000054470 408 ntBASIC13.42□□□□□ -0.26
Trim46Q7TNM2 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Trim46Q7TNM2 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim46Q7TNM2 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Trim46Q7TNM2 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trim46Q7TNM2 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim46Q7TNM2 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trim46Q7TNM2 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim46Q7TNM2 Ssr1-204ENSMUST00000225319 1610 ntBASIC13.42□□□□□ -0.26
Trim46Q7TNM2 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim46Q7TNM2 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim46Q7TNM2 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim46Q7TNM2 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim46Q7TNM2 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim46Q7TNM2 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim46Q7TNM2 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms