Protein–RNA interactions for Protein: Q6ZWR6

Syne1, Nesprin-1, mousemouse

Predictions only

Length 8,799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne1Q6ZWR6 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Syne1Q6ZWR6 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Syne1Q6ZWR6 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
Syne1Q6ZWR6 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC4.87□□□□□ -1.63
Syne1Q6ZWR6 Gm43072-201ENSMUST00000200283 1671 ntBASIC4.87□□□□□ -1.63
Syne1Q6ZWR6 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Syne1Q6ZWR6 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Syne1Q6ZWR6 Celf4-206ENSMUST00000224553 1729 ntBASIC4.87□□□□□ -1.63
Syne1Q6ZWR6 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Syne1Q6ZWR6 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Syne1Q6ZWR6 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
Syne1Q6ZWR6 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Syne1Q6ZWR6 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
Syne1Q6ZWR6 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Syne1Q6ZWR6 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Syne1Q6ZWR6 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Syne1Q6ZWR6 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC4.87□□□□□ -1.63
Syne1Q6ZWR6 Gm12957-201ENSMUST00000117835 377 ntBASIC4.87□□□□□ -1.63
Syne1Q6ZWR6 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
Syne1Q6ZWR6 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Syne1Q6ZWR6 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
Syne1Q6ZWR6 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Syne1Q6ZWR6 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC4.87□□□□□ -1.63
Syne1Q6ZWR6 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Syne1Q6ZWR6 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Syne1Q6ZWR6 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC4.87□□□□□ -1.63
Syne1Q6ZWR6 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Syne1Q6ZWR6 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Syne1Q6ZWR6 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Syne1Q6ZWR6 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Syne1Q6ZWR6 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Syne1Q6ZWR6 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC4.87□□□□□ -1.63
Syne1Q6ZWR6 Gm7820-201ENSMUST00000121012 1052 ntBASIC4.87□□□□□ -1.63
Syne1Q6ZWR6 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Syne1Q6ZWR6 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Syne1Q6ZWR6 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Syne1Q6ZWR6 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Syne1Q6ZWR6 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Syne1Q6ZWR6 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC4.87□□□□□ -1.63
Syne1Q6ZWR6 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Syne1Q6ZWR6 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Syne1Q6ZWR6 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Syne1Q6ZWR6 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Syne1Q6ZWR6 Gm28911-201ENSMUST00000188837 117 ntBASIC4.86□□□□□ -1.63
Syne1Q6ZWR6 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC4.86□□□□□ -1.63
Syne1Q6ZWR6 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC4.86□□□□□ -1.63
Syne1Q6ZWR6 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC4.86□□□□□ -1.63
Syne1Q6ZWR6 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Syne1Q6ZWR6 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Syne1Q6ZWR6 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Syne1Q6ZWR6 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Syne1Q6ZWR6 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Syne1Q6ZWR6 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Syne1Q6ZWR6 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Syne1Q6ZWR6 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Syne1Q6ZWR6 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
Syne1Q6ZWR6 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
Syne1Q6ZWR6 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC4.86□□□□□ -1.63
Syne1Q6ZWR6 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Syne1Q6ZWR6 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Syne1Q6ZWR6 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
Syne1Q6ZWR6 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Syne1Q6ZWR6 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Syne1Q6ZWR6 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC4.86□□□□□ -1.63
Syne1Q6ZWR6 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC4.86□□□□□ -1.63
Syne1Q6ZWR6 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
Syne1Q6ZWR6 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Syne1Q6ZWR6 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Syne1Q6ZWR6 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC4.86□□□□□ -1.63
Syne1Q6ZWR6 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Syne1Q6ZWR6 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Syne1Q6ZWR6 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Syne1Q6ZWR6 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Syne1Q6ZWR6 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC4.86□□□□□ -1.63
Syne1Q6ZWR6 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC4.86□□□□□ -1.63
Syne1Q6ZWR6 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Syne1Q6ZWR6 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Syne1Q6ZWR6 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Syne1Q6ZWR6 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
Syne1Q6ZWR6 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
Syne1Q6ZWR6 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Syne1Q6ZWR6 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Syne1Q6ZWR6 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
Syne1Q6ZWR6 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Syne1Q6ZWR6 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Syne1Q6ZWR6 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Syne1Q6ZWR6 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Syne1Q6ZWR6 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC4.86□□□□□ -1.63
Syne1Q6ZWR6 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC4.86□□□□□ -1.63
Syne1Q6ZWR6 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC4.86□□□□□ -1.63
Syne1Q6ZWR6 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC4.86□□□□□ -1.63
Syne1Q6ZWR6 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Syne1Q6ZWR6 Gm27701-201ENSMUST00000184498 110 ntBASIC4.86□□□□□ -1.63
Syne1Q6ZWR6 Gm46209-201ENSMUST00000217912 553 ntBASIC4.86□□□□□ -1.63
Syne1Q6ZWR6 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC4.86□□□□□ -1.63
Syne1Q6ZWR6 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC4.86□□□□□ -1.63
Syne1Q6ZWR6 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Syne1Q6ZWR6 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC4.86□□□□□ -1.63
Syne1Q6ZWR6 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Syne1Q6ZWR6 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms