Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 AL589735.1-201ENSMUST00000224353 270 ntBASIC16.18■□□□□ 0.18
Ddx55Q6ZPL9 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ddx55Q6ZPL9 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ddx55Q6ZPL9 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ddx55Q6ZPL9 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ddx55Q6ZPL9 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ddx55Q6ZPL9 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ddx55Q6ZPL9 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC16.18■□□□□ 0.18
Ddx55Q6ZPL9 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ddx55Q6ZPL9 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ddx55Q6ZPL9 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ddx55Q6ZPL9 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC16.17■□□□□ 0.18
Ddx55Q6ZPL9 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ddx55Q6ZPL9 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Ddx55Q6ZPL9 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ddx55Q6ZPL9 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ddx55Q6ZPL9 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Ddx55Q6ZPL9 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ddx55Q6ZPL9 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Ddx55Q6ZPL9 Gm16342-201ENSMUST00000124025 1025 ntBASIC16.17■□□□□ 0.18
Ddx55Q6ZPL9 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
Ddx55Q6ZPL9 Gm24420-201ENSMUST00000176676 59 ntBASIC16.17■□□□□ 0.18
Ddx55Q6ZPL9 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC16.17■□□□□ 0.18
Ddx55Q6ZPL9 Gm44974-201ENSMUST00000206387 1279 ntBASIC16.17■□□□□ 0.18
Ddx55Q6ZPL9 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ddx55Q6ZPL9 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Ddx55Q6ZPL9 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ddx55Q6ZPL9 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ddx55Q6ZPL9 Gm42632-201ENSMUST00000201707 2411 ntBASIC16.17■□□□□ 0.18
Ddx55Q6ZPL9 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Ddx55Q6ZPL9 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
Ddx55Q6ZPL9 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ddx55Q6ZPL9 AC114543.1-201ENSMUST00000226451 1558 ntBASIC16.17■□□□□ 0.18
Ddx55Q6ZPL9 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ddx55Q6ZPL9 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Ddx55Q6ZPL9 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Ddx55Q6ZPL9 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ddx55Q6ZPL9 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ddx55Q6ZPL9 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ddx55Q6ZPL9 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ddx55Q6ZPL9 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Ddx55Q6ZPL9 Gm37812-201ENSMUST00000195216 2475 ntBASIC16.16■□□□□ 0.18
Ddx55Q6ZPL9 Gm23931-201ENSMUST00000103842 109 ntBASIC16.16■□□□□ 0.18
Ddx55Q6ZPL9 Gm13612-201ENSMUST00000119276 390 ntBASIC16.16■□□□□ 0.18
Ddx55Q6ZPL9 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC16.16■□□□□ 0.18
Ddx55Q6ZPL9 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC16.16■□□□□ 0.18
Ddx55Q6ZPL9 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ddx55Q6ZPL9 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC16.16■□□□□ 0.18
Ddx55Q6ZPL9 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ddx55Q6ZPL9 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC16.16■□□□□ 0.18
Ddx55Q6ZPL9 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ddx55Q6ZPL9 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Ddx55Q6ZPL9 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ddx55Q6ZPL9 Gm11661-201ENSMUST00000121761 1327 ntBASIC16.16■□□□□ 0.18
Ddx55Q6ZPL9 Gm13050-201ENSMUST00000122149 1345 ntBASIC16.16■□□□□ 0.18
Ddx55Q6ZPL9 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC16.16■□□□□ 0.18
Ddx55Q6ZPL9 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ddx55Q6ZPL9 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
Ddx55Q6ZPL9 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ddx55Q6ZPL9 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Ddx55Q6ZPL9 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ddx55Q6ZPL9 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ddx55Q6ZPL9 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ddx55Q6ZPL9 Gm42853-201ENSMUST00000201273 1387 ntBASIC16.15■□□□□ 0.18
Ddx55Q6ZPL9 Gm37015-201ENSMUST00000192763 1521 ntBASIC16.15■□□□□ 0.18
Ddx55Q6ZPL9 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ddx55Q6ZPL9 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC16.15■□□□□ 0.18
Ddx55Q6ZPL9 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ddx55Q6ZPL9 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ddx55Q6ZPL9 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ddx55Q6ZPL9 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ddx55Q6ZPL9 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ddx55Q6ZPL9 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ddx55Q6ZPL9 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ddx55Q6ZPL9 Gm27772-201ENSMUST00000184900 187 ntBASIC16.15■□□□□ 0.18
Ddx55Q6ZPL9 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
Ddx55Q6ZPL9 Ighv1-51-201ENSMUST00000192903 354 ntBASIC16.15■□□□□ 0.18
Ddx55Q6ZPL9 Gm42471-201ENSMUST00000201457 1865 ntBASIC16.15■□□□□ 0.18
Ddx55Q6ZPL9 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC16.15■□□□□ 0.18
Ddx55Q6ZPL9 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ddx55Q6ZPL9 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ddx55Q6ZPL9 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ddx55Q6ZPL9 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ddx55Q6ZPL9 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ddx55Q6ZPL9 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ddx55Q6ZPL9 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ddx55Q6ZPL9 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ddx55Q6ZPL9 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Ddx55Q6ZPL9 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ddx55Q6ZPL9 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ddx55Q6ZPL9 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
Ddx55Q6ZPL9 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC16.14■□□□□ 0.17
Ddx55Q6ZPL9 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ddx55Q6ZPL9 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Ddx55Q6ZPL9 Gm9109-201ENSMUST00000120254 1405 ntBASIC16.14■□□□□ 0.17
Ddx55Q6ZPL9 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Ddx55Q6ZPL9 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC16.14■□□□□ 0.17
Ddx55Q6ZPL9 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC16.14■□□□□ 0.17
Ddx55Q6ZPL9 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC16.14■□□□□ 0.17
Ddx55Q6ZPL9 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms