Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Snrnp40Q6PE01 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Snrnp40Q6PE01 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC12.53□□□□□ -0.4
Snrnp40Q6PE01 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Snrnp40Q6PE01 Gm15240-201ENSMUST00000118156 720 ntBASIC12.53□□□□□ -0.4
Snrnp40Q6PE01 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Snrnp40Q6PE01 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC12.53□□□□□ -0.4
Snrnp40Q6PE01 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC12.53□□□□□ -0.4
Snrnp40Q6PE01 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC12.53□□□□□ -0.4
Snrnp40Q6PE01 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC12.53□□□□□ -0.4
Snrnp40Q6PE01 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
Snrnp40Q6PE01 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
Snrnp40Q6PE01 Gm37424-201ENSMUST00000191727 561 ntBASIC12.53□□□□□ -0.4
Snrnp40Q6PE01 Ighv8-14-201ENSMUST00000196781 358 ntBASIC12.53□□□□□ -0.4
Snrnp40Q6PE01 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC12.53□□□□□ -0.4
Snrnp40Q6PE01 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Snrnp40Q6PE01 Gm8463-201ENSMUST00000208573 613 ntBASIC12.53□□□□□ -0.4
Snrnp40Q6PE01 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Snrnp40Q6PE01 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Snrnp40Q6PE01 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Snrnp40Q6PE01 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Snrnp40Q6PE01 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Snrnp40Q6PE01 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Snrnp40Q6PE01 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Snrnp40Q6PE01 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Snrnp40Q6PE01 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Snrnp40Q6PE01 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Snrnp40Q6PE01 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Snrnp40Q6PE01 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC12.53□□□□□ -0.4
Snrnp40Q6PE01 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Snrnp40Q6PE01 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC12.53□□□□□ -0.4
Snrnp40Q6PE01 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Snrnp40Q6PE01 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Snrnp40Q6PE01 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Snrnp40Q6PE01 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Snrnp40Q6PE01 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Snrnp40Q6PE01 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Snrnp40Q6PE01 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Snrnp40Q6PE01 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Snrnp40Q6PE01 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Snrnp40Q6PE01 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Snrnp40Q6PE01 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Snrnp40Q6PE01 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Snrnp40Q6PE01 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Snrnp40Q6PE01 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Snrnp40Q6PE01 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Snrnp40Q6PE01 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC12.52□□□□□ -0.4
Snrnp40Q6PE01 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Snrnp40Q6PE01 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Snrnp40Q6PE01 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Snrnp40Q6PE01 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Snrnp40Q6PE01 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Snrnp40Q6PE01 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC12.52□□□□□ -0.4
Snrnp40Q6PE01 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Snrnp40Q6PE01 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Snrnp40Q6PE01 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Snrnp40Q6PE01 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Snrnp40Q6PE01 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Snrnp40Q6PE01 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC12.52□□□□□ -0.41
Snrnp40Q6PE01 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC12.52□□□□□ -0.41
Snrnp40Q6PE01 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Snrnp40Q6PE01 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Snrnp40Q6PE01 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
Snrnp40Q6PE01 Gm12928-201ENSMUST00000117115 573 ntBASIC12.52□□□□□ -0.41
Snrnp40Q6PE01 Gm14660-201ENSMUST00000119809 575 ntBASIC12.52□□□□□ -0.41
Snrnp40Q6PE01 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC12.52□□□□□ -0.41
Snrnp40Q6PE01 Gm8652-201ENSMUST00000181363 964 ntBASIC12.52□□□□□ -0.41
Snrnp40Q6PE01 Gm27847-201ENSMUST00000183711 107 ntBASIC12.52□□□□□ -0.41
Snrnp40Q6PE01 Gm27375-201ENSMUST00000183799 107 ntBASIC12.52□□□□□ -0.41
Snrnp40Q6PE01 Gm27731-201ENSMUST00000185192 107 ntBASIC12.52□□□□□ -0.41
Snrnp40Q6PE01 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Snrnp40Q6PE01 Gm43094-201ENSMUST00000196549 921 ntBASIC12.52□□□□□ -0.41
Snrnp40Q6PE01 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Snrnp40Q6PE01 Gm9728-201ENSMUST00000200197 1055 ntBASIC12.52□□□□□ -0.41
Snrnp40Q6PE01 Gm7287-201ENSMUST00000205267 602 ntBASIC12.52□□□□□ -0.41
Snrnp40Q6PE01 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC12.52□□□□□ -0.41
Snrnp40Q6PE01 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Snrnp40Q6PE01 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Snrnp40Q6PE01 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Snrnp40Q6PE01 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Snrnp40Q6PE01 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Snrnp40Q6PE01 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Snrnp40Q6PE01 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Snrnp40Q6PE01 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Snrnp40Q6PE01 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Snrnp40Q6PE01 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Snrnp40Q6PE01 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Snrnp40Q6PE01 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Snrnp40Q6PE01 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Snrnp40Q6PE01 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Snrnp40Q6PE01 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Snrnp40Q6PE01 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Snrnp40Q6PE01 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Snrnp40Q6PE01 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Snrnp40Q6PE01 Gm14780-201ENSMUST00000118387 2737 ntBASIC12.52□□□□□ -0.41
Snrnp40Q6PE01 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Snrnp40Q6PE01 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Snrnp40Q6PE01 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC12.51□□□□□ -0.41
Snrnp40Q6PE01 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Snrnp40Q6PE01 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms