Protein–RNA interactions for Protein: Q6P8W9

Hmgb4, High mobility group protein B4, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb4Q6P8W9 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hmgb4Q6P8W9 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hmgb4Q6P8W9 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hmgb4Q6P8W9 Gm10710-201ENSMUST00000047876 3971 ntBASIC15.01□□□□□ -0.01
Hmgb4Q6P8W9 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hmgb4Q6P8W9 Gm24543-201ENSMUST00000103867 82 ntBASIC15.01□□□□□ -0.01
Hmgb4Q6P8W9 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Hmgb4Q6P8W9 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC15.01□□□□□ -0.01
Hmgb4Q6P8W9 Gm9719-201ENSMUST00000162765 543 ntBASIC15.01□□□□□ -0.01
Hmgb4Q6P8W9 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC15.01□□□□□ -0.01
Hmgb4Q6P8W9 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC15.01□□□□□ -0.01
Hmgb4Q6P8W9 Gtpbp10-211ENSMUST00000198799 648 ntBASIC15.01□□□□□ -0.01
Hmgb4Q6P8W9 Gm44855-201ENSMUST00000205725 362 ntBASIC15.01□□□□□ -0.01
Hmgb4Q6P8W9 Gm30437-201ENSMUST00000206086 1201 ntBASIC15.01□□□□□ -0.01
Hmgb4Q6P8W9 Gm7730-201ENSMUST00000212486 454 ntBASIC15.01□□□□□ -0.01
Hmgb4Q6P8W9 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hmgb4Q6P8W9 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Hmgb4Q6P8W9 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC15.01□□□□□ -0.01
Hmgb4Q6P8W9 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Hmgb4Q6P8W9 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hmgb4Q6P8W9 Gm43195-201ENSMUST00000200614 2332 ntBASIC15.01□□□□□ -0.01
Hmgb4Q6P8W9 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Hmgb4Q6P8W9 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hmgb4Q6P8W9 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Hmgb4Q6P8W9 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Hmgb4Q6P8W9 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hmgb4Q6P8W9 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hmgb4Q6P8W9 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hmgb4Q6P8W9 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hmgb4Q6P8W9 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hmgb4Q6P8W9 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hmgb4Q6P8W9 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hmgb4Q6P8W9 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC15.01□□□□□ -0.01
Hmgb4Q6P8W9 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Hmgb4Q6P8W9 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Hmgb4Q6P8W9 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Hmgb4Q6P8W9 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Hmgb4Q6P8W9 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Hmgb4Q6P8W9 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Hmgb4Q6P8W9 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Hmgb4Q6P8W9 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC15□□□□□ -0.01
Hmgb4Q6P8W9 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Hmgb4Q6P8W9 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC15□□□□□ -0.01
Hmgb4Q6P8W9 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Hmgb4Q6P8W9 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC15□□□□□ -0.01
Hmgb4Q6P8W9 Syt7-205ENSMUST00000224135 1557 ntBASIC15□□□□□ -0.01
Hmgb4Q6P8W9 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Hmgb4Q6P8W9 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Hmgb4Q6P8W9 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Hmgb4Q6P8W9 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Hmgb4Q6P8W9 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Hmgb4Q6P8W9 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Hmgb4Q6P8W9 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Hmgb4Q6P8W9 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Hmgb4Q6P8W9 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC15□□□□□ -0.01
Hmgb4Q6P8W9 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Hmgb4Q6P8W9 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Hmgb4Q6P8W9 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Hmgb4Q6P8W9 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Hmgb4Q6P8W9 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
Hmgb4Q6P8W9 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Hmgb4Q6P8W9 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Hmgb4Q6P8W9 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Hmgb4Q6P8W9 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC14.99□□□□□ -0.01
Hmgb4Q6P8W9 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Hmgb4Q6P8W9 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
Hmgb4Q6P8W9 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Hmgb4Q6P8W9 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC14.99□□□□□ -0.01
Hmgb4Q6P8W9 Gm45098-201ENSMUST00000207179 657 ntBASIC14.99□□□□□ -0.01
Hmgb4Q6P8W9 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Hmgb4Q6P8W9 Gm7775-201ENSMUST00000218871 853 ntBASIC14.99□□□□□ -0.01
Hmgb4Q6P8W9 AC124732.1-201ENSMUST00000221551 910 ntBASIC14.99□□□□□ -0.01
Hmgb4Q6P8W9 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Hmgb4Q6P8W9 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Hmgb4Q6P8W9 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Hmgb4Q6P8W9 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Hmgb4Q6P8W9 Mxra8os-201ENSMUST00000097740 687 ntBASIC14.99□□□□□ -0.01
Hmgb4Q6P8W9 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Hmgb4Q6P8W9 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Hmgb4Q6P8W9 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Hmgb4Q6P8W9 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Hmgb4Q6P8W9 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Hmgb4Q6P8W9 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Hmgb4Q6P8W9 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Hmgb4Q6P8W9 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Hmgb4Q6P8W9 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Hmgb4Q6P8W9 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
Hmgb4Q6P8W9 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Hmgb4Q6P8W9 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Hmgb4Q6P8W9 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Hmgb4Q6P8W9 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Hmgb4Q6P8W9 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Hmgb4Q6P8W9 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Hmgb4Q6P8W9 Gm5566-201ENSMUST00000116118 459 ntBASIC14.98□□□□□ -0.01
Hmgb4Q6P8W9 Gm14719-201ENSMUST00000121891 340 ntBASIC14.98□□□□□ -0.01
Hmgb4Q6P8W9 Mir1897-201ENSMUST00000122581 272 ntBASIC14.98□□□□□ -0.01
Hmgb4Q6P8W9 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Hmgb4Q6P8W9 H2-Pa-201ENSMUST00000182803 626 ntBASIC14.98□□□□□ -0.01
Hmgb4Q6P8W9 Gm27680-201ENSMUST00000184192 160 ntBASIC14.98□□□□□ -0.01
Hmgb4Q6P8W9 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms