Protein–RNA interactions for Protein: Q6P1D7

Slx4, Structure-specific endonuclease subunit SLX4, mousemouse

Predictions only

Length 1,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slx4Q6P1D7 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Slx4Q6P1D7 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC21.66■■□□□ 1.06
Slx4Q6P1D7 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC21.66■■□□□ 1.06
Slx4Q6P1D7 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Slx4Q6P1D7 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Slx4Q6P1D7 Gm9109-201ENSMUST00000120254 1405 ntBASIC21.66■■□□□ 1.06
Slx4Q6P1D7 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Slx4Q6P1D7 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC21.65■■□□□ 1.06
Slx4Q6P1D7 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC21.65■■□□□ 1.06
Slx4Q6P1D7 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Slx4Q6P1D7 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Slx4Q6P1D7 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Slx4Q6P1D7 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
Slx4Q6P1D7 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Slx4Q6P1D7 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Slx4Q6P1D7 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Slx4Q6P1D7 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Slx4Q6P1D7 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC21.65■■□□□ 1.06
Slx4Q6P1D7 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Slx4Q6P1D7 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
Slx4Q6P1D7 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Slx4Q6P1D7 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Slx4Q6P1D7 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Slx4Q6P1D7 Gm22323-201ENSMUST00000103832 109 ntBASIC21.65■■□□□ 1.06
Slx4Q6P1D7 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC21.65■■□□□ 1.06
Slx4Q6P1D7 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC21.65■■□□□ 1.06
Slx4Q6P1D7 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Slx4Q6P1D7 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC21.65■■□□□ 1.06
Slx4Q6P1D7 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Slx4Q6P1D7 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Slx4Q6P1D7 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Slx4Q6P1D7 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Slx4Q6P1D7 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC21.64■■□□□ 1.06
Slx4Q6P1D7 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Slx4Q6P1D7 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC21.64■■□□□ 1.06
Slx4Q6P1D7 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC21.64■■□□□ 1.05
Slx4Q6P1D7 Gm37728-201ENSMUST00000195025 2292 ntBASIC21.64■■□□□ 1.05
Slx4Q6P1D7 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Slx4Q6P1D7 AC115735.4-201ENSMUST00000227460 1944 ntBASIC21.64■■□□□ 1.05
Slx4Q6P1D7 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
Slx4Q6P1D7 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Slx4Q6P1D7 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Slx4Q6P1D7 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Slx4Q6P1D7 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Slx4Q6P1D7 Gm26927-201ENSMUST00000182385 965 ntBASIC21.64■■□□□ 1.05
Slx4Q6P1D7 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Slx4Q6P1D7 Snora73a-201ENSMUST00000082453 205 ntBASIC21.64■■□□□ 1.05
Slx4Q6P1D7 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Slx4Q6P1D7 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
Slx4Q6P1D7 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Slx4Q6P1D7 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
Slx4Q6P1D7 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC21.64■■□□□ 1.05
Slx4Q6P1D7 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Slx4Q6P1D7 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Slx4Q6P1D7 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Slx4Q6P1D7 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Slx4Q6P1D7 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Slx4Q6P1D7 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Slx4Q6P1D7 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Slx4Q6P1D7 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Slx4Q6P1D7 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Slx4Q6P1D7 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Slx4Q6P1D7 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Slx4Q6P1D7 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC21.63■■□□□ 1.05
Slx4Q6P1D7 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Slx4Q6P1D7 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
Slx4Q6P1D7 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC21.63■■□□□ 1.05
Slx4Q6P1D7 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Slx4Q6P1D7 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC21.63■■□□□ 1.05
Slx4Q6P1D7 Gm3786-201ENSMUST00000202659 378 ntBASIC21.63■■□□□ 1.05
Slx4Q6P1D7 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC21.63■■□□□ 1.05
Slx4Q6P1D7 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Slx4Q6P1D7 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Slx4Q6P1D7 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
Slx4Q6P1D7 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Slx4Q6P1D7 Gm8706-201ENSMUST00000197372 1491 ntBASIC21.63■■□□□ 1.05
Slx4Q6P1D7 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Slx4Q6P1D7 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Slx4Q6P1D7 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Slx4Q6P1D7 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC21.62■■□□□ 1.05
Slx4Q6P1D7 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC21.62■■□□□ 1.05
Slx4Q6P1D7 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Slx4Q6P1D7 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Slx4Q6P1D7 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Slx4Q6P1D7 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC21.62■■□□□ 1.05
Slx4Q6P1D7 Gm29608-201ENSMUST00000190444 463 ntBASIC21.62■■□□□ 1.05
Slx4Q6P1D7 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC21.62■■□□□ 1.05
Slx4Q6P1D7 AC073947.2-201ENSMUST00000215888 1130 ntBASIC21.62■■□□□ 1.05
Slx4Q6P1D7 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Slx4Q6P1D7 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Slx4Q6P1D7 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
Slx4Q6P1D7 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Slx4Q6P1D7 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Slx4Q6P1D7 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Slx4Q6P1D7 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Slx4Q6P1D7 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Slx4Q6P1D7 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
Slx4Q6P1D7 Gm6203-201ENSMUST00000209575 1342 ntBASIC21.62■■□□□ 1.05
Slx4Q6P1D7 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC21.61■■□□□ 1.05
Slx4Q6P1D7 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC21.61■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms