Protein–RNA interactions for Protein: Q6IFX4

Krt39, Keratin, type I cytoskeletal 39, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt39Q6IFX4 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Krt39Q6IFX4 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Krt39Q6IFX4 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC15.84■□□□□ 0.13
Krt39Q6IFX4 Gm9385-201ENSMUST00000117563 472 ntBASIC15.84■□□□□ 0.13
Krt39Q6IFX4 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Krt39Q6IFX4 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Krt39Q6IFX4 Thap2-203ENSMUST00000218989 527 ntBASIC15.84■□□□□ 0.13
Krt39Q6IFX4 AC102291.3-201ENSMUST00000226566 405 ntBASIC15.84■□□□□ 0.13
Krt39Q6IFX4 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Krt39Q6IFX4 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Krt39Q6IFX4 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Krt39Q6IFX4 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Krt39Q6IFX4 AC122901.1-201ENSMUST00000214203 1790 ntBASIC15.84■□□□□ 0.13
Krt39Q6IFX4 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Krt39Q6IFX4 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Krt39Q6IFX4 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Krt39Q6IFX4 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Krt39Q6IFX4 Ntrk2-209ENSMUST00000225950 2640 ntBASIC15.83■□□□□ 0.13
Krt39Q6IFX4 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
Krt39Q6IFX4 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Krt39Q6IFX4 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Krt39Q6IFX4 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC15.83■□□□□ 0.13
Krt39Q6IFX4 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC15.83■□□□□ 0.13
Krt39Q6IFX4 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Krt39Q6IFX4 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC15.83■□□□□ 0.12
Krt39Q6IFX4 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Krt39Q6IFX4 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Krt39Q6IFX4 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Krt39Q6IFX4 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC15.83■□□□□ 0.12
Krt39Q6IFX4 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC15.83■□□□□ 0.12
Krt39Q6IFX4 Gm45098-201ENSMUST00000207179 657 ntBASIC15.83■□□□□ 0.12
Krt39Q6IFX4 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC15.83■□□□□ 0.12
Krt39Q6IFX4 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Krt39Q6IFX4 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC15.83■□□□□ 0.12
Krt39Q6IFX4 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Krt39Q6IFX4 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC15.83■□□□□ 0.12
Krt39Q6IFX4 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Krt39Q6IFX4 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Krt39Q6IFX4 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Krt39Q6IFX4 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Krt39Q6IFX4 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Krt39Q6IFX4 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Krt39Q6IFX4 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Krt39Q6IFX4 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Krt39Q6IFX4 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Krt39Q6IFX4 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Krt39Q6IFX4 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Krt39Q6IFX4 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Krt39Q6IFX4 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Krt39Q6IFX4 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Krt39Q6IFX4 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Krt39Q6IFX4 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Krt39Q6IFX4 Gm2420-202ENSMUST00000202224 2249 ntBASIC15.82■□□□□ 0.12
Krt39Q6IFX4 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Krt39Q6IFX4 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Krt39Q6IFX4 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Krt39Q6IFX4 Gm27301-201ENSMUST00000184012 127 ntBASIC15.82■□□□□ 0.12
Krt39Q6IFX4 Gm27525-201ENSMUST00000184465 107 ntBASIC15.82■□□□□ 0.12
Krt39Q6IFX4 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC15.82■□□□□ 0.12
Krt39Q6IFX4 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Krt39Q6IFX4 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Krt39Q6IFX4 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Krt39Q6IFX4 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Krt39Q6IFX4 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Krt39Q6IFX4 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Krt39Q6IFX4 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Krt39Q6IFX4 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC15.81■□□□□ 0.12
Krt39Q6IFX4 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Krt39Q6IFX4 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC15.81■□□□□ 0.12
Krt39Q6IFX4 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC15.81■□□□□ 0.12
Krt39Q6IFX4 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Krt39Q6IFX4 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Krt39Q6IFX4 Gm12260-201ENSMUST00000122447 411 ntBASIC15.81■□□□□ 0.12
Krt39Q6IFX4 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC15.81■□□□□ 0.12
Krt39Q6IFX4 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Krt39Q6IFX4 Gm5479-201ENSMUST00000160578 435 ntBASIC15.81■□□□□ 0.12
Krt39Q6IFX4 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Krt39Q6IFX4 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Krt39Q6IFX4 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Krt39Q6IFX4 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Krt39Q6IFX4 Gm37019-201ENSMUST00000192133 2134 ntBASIC15.81■□□□□ 0.12
Krt39Q6IFX4 Gm42769-201ENSMUST00000198576 1659 ntBASIC15.81■□□□□ 0.12
Krt39Q6IFX4 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Krt39Q6IFX4 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Krt39Q6IFX4 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Krt39Q6IFX4 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Krt39Q6IFX4 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Krt39Q6IFX4 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Krt39Q6IFX4 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC15.81■□□□□ 0.12
Krt39Q6IFX4 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Krt39Q6IFX4 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Krt39Q6IFX4 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Krt39Q6IFX4 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC15.8■□□□□ 0.12
Krt39Q6IFX4 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
Krt39Q6IFX4 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Krt39Q6IFX4 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Krt39Q6IFX4 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC15.8■□□□□ 0.12
Krt39Q6IFX4 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Krt39Q6IFX4 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Krt39Q6IFX4 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms