Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Scn9aQ62205 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Scn9aQ62205 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Scn9aQ62205 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC16.54■□□□□ 0.24
Scn9aQ62205 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Scn9aQ62205 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
Scn9aQ62205 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Scn9aQ62205 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Scn9aQ62205 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Scn9aQ62205 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Scn9aQ62205 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Scn9aQ62205 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Scn9aQ62205 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Scn9aQ62205 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC16.53■□□□□ 0.24
Scn9aQ62205 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Scn9aQ62205 Gm5850-201ENSMUST00000192923 1206 ntBASIC16.53■□□□□ 0.24
Scn9aQ62205 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Scn9aQ62205 Olfr284-202ENSMUST00000206647 966 ntBASIC16.53■□□□□ 0.24
Scn9aQ62205 Mettl6-204ENSMUST00000227595 1027 ntBASIC16.53■□□□□ 0.24
Scn9aQ62205 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Scn9aQ62205 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Scn9aQ62205 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Scn9aQ62205 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Scn9aQ62205 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Scn9aQ62205 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Scn9aQ62205 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Scn9aQ62205 Gm7993-201ENSMUST00000200970 1384 ntBASIC16.53■□□□□ 0.24
Scn9aQ62205 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Scn9aQ62205 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Scn9aQ62205 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Scn9aQ62205 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
Scn9aQ62205 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC16.53■□□□□ 0.24
Scn9aQ62205 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Scn9aQ62205 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Scn9aQ62205 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC16.53■□□□□ 0.24
Scn9aQ62205 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Scn9aQ62205 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Scn9aQ62205 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Scn9aQ62205 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC16.52■□□□□ 0.24
Scn9aQ62205 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Scn9aQ62205 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Scn9aQ62205 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Scn9aQ62205 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC16.52■□□□□ 0.24
Scn9aQ62205 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Scn9aQ62205 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Scn9aQ62205 Gm45865-201ENSMUST00000211815 945 ntBASIC16.52■□□□□ 0.24
Scn9aQ62205 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Scn9aQ62205 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Scn9aQ62205 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Scn9aQ62205 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Scn9aQ62205 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Scn9aQ62205 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Scn9aQ62205 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Scn9aQ62205 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Scn9aQ62205 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Scn9aQ62205 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Scn9aQ62205 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Scn9aQ62205 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Scn9aQ62205 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Scn9aQ62205 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Scn9aQ62205 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Scn9aQ62205 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Scn9aQ62205 Gm42627-201ENSMUST00000197347 224 ntBASIC16.51■□□□□ 0.23
Scn9aQ62205 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Scn9aQ62205 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Scn9aQ62205 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Scn9aQ62205 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Scn9aQ62205 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Scn9aQ62205 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Scn9aQ62205 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC16.51■□□□□ 0.23
Scn9aQ62205 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
Scn9aQ62205 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Scn9aQ62205 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Scn9aQ62205 Mir686-201ENSMUST00000102174 109 ntBASIC16.51■□□□□ 0.23
Scn9aQ62205 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Scn9aQ62205 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Scn9aQ62205 Gm26927-201ENSMUST00000182385 965 ntBASIC16.51■□□□□ 0.23
Scn9aQ62205 Ighv1-62-201ENSMUST00000193406 350 ntBASIC16.51■□□□□ 0.23
Scn9aQ62205 Gm37008-201ENSMUST00000195712 319 ntBASIC16.51■□□□□ 0.23
Scn9aQ62205 Cts7-204ENSMUST00000225321 1257 ntBASIC16.51■□□□□ 0.23
Scn9aQ62205 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC16.51■□□□□ 0.23
Scn9aQ62205 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Scn9aQ62205 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Scn9aQ62205 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC16.51■□□□□ 0.23
Scn9aQ62205 Gm8706-201ENSMUST00000197372 1491 ntBASIC16.51■□□□□ 0.23
Scn9aQ62205 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC16.51■□□□□ 0.23
Scn9aQ62205 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC16.5■□□□□ 0.23
Scn9aQ62205 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Scn9aQ62205 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Scn9aQ62205 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Scn9aQ62205 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Scn9aQ62205 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Scn9aQ62205 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC16.5■□□□□ 0.23
Scn9aQ62205 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Scn9aQ62205 Gm37728-201ENSMUST00000195025 2292 ntBASIC16.5■□□□□ 0.23
Scn9aQ62205 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Scn9aQ62205 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Scn9aQ62205 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Scn9aQ62205 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC16.5■□□□□ 0.23
Scn9aQ62205 Gm38000-201ENSMUST00000192390 1215 ntBASIC16.5■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 73 ms