Protein–RNA interactions for Protein: Q62158

Trim27, Zinc finger protein RFP, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim27Q62158 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim27Q62158 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Trim27Q62158 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim27Q62158 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim27Q62158 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim27Q62158 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim27Q62158 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim27Q62158 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim27Q62158 Gm45751-201ENSMUST00000210185 1573 ntBASIC17.57■□□□□ 0.4
Trim27Q62158 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Trim27Q62158 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC17.57■□□□□ 0.4
Trim27Q62158 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim27Q62158 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim27Q62158 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trim27Q62158 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim27Q62158 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trim27Q62158 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim27Q62158 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim27Q62158 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim27Q62158 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim27Q62158 Gm15693-201ENSMUST00000120470 637 ntBASIC17.56■□□□□ 0.4
Trim27Q62158 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trim27Q62158 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Trim27Q62158 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trim27Q62158 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim27Q62158 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Trim27Q62158 AC126549.2-201ENSMUST00000223997 1976 ntBASIC17.56■□□□□ 0.4
Trim27Q62158 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC17.56■□□□□ 0.4
Trim27Q62158 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim27Q62158 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC17.56■□□□□ 0.4
Trim27Q62158 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim27Q62158 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trim27Q62158 Gm42471-201ENSMUST00000201457 1865 ntBASIC17.56■□□□□ 0.4
Trim27Q62158 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trim27Q62158 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trim27Q62158 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trim27Q62158 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC17.56■□□□□ 0.4
Trim27Q62158 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim27Q62158 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim27Q62158 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim27Q62158 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim27Q62158 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim27Q62158 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Trim27Q62158 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim27Q62158 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim27Q62158 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim27Q62158 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim27Q62158 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim27Q62158 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Trim27Q62158 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Trim27Q62158 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Trim27Q62158 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim27Q62158 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC17.55■□□□□ 0.4
Trim27Q62158 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
Trim27Q62158 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC17.55■□□□□ 0.4
Trim27Q62158 Gm28630-201ENSMUST00000187806 498 ntBASIC17.55■□□□□ 0.4
Trim27Q62158 AA619741-201ENSMUST00000195095 646 ntBASIC17.55■□□□□ 0.4
Trim27Q62158 Gm7774-201ENSMUST00000200064 533 ntBASIC17.55■□□□□ 0.4
Trim27Q62158 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Trim27Q62158 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim27Q62158 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
Trim27Q62158 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim27Q62158 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Trim27Q62158 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim27Q62158 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim27Q62158 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim27Q62158 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Trim27Q62158 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Trim27Q62158 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim27Q62158 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC17.55■□□□□ 0.4
Trim27Q62158 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim27Q62158 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim27Q62158 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Trim27Q62158 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim27Q62158 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim27Q62158 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Trim27Q62158 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim27Q62158 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Trim27Q62158 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim27Q62158 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim27Q62158 Gm7336-201ENSMUST00000107041 1232 ntBASIC17.54■□□□□ 0.4
Trim27Q62158 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC17.54■□□□□ 0.4
Trim27Q62158 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim27Q62158 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Trim27Q62158 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Trim27Q62158 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trim27Q62158 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC17.54■□□□□ 0.4
Trim27Q62158 Gm26308-201ENSMUST00000157768 69 ntBASIC17.54■□□□□ 0.4
Trim27Q62158 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
Trim27Q62158 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC17.54■□□□□ 0.4
Trim27Q62158 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC17.54■□□□□ 0.4
Trim27Q62158 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC17.54■□□□□ 0.4
Trim27Q62158 Dupd1-202ENSMUST00000224735 548 ntBASIC17.54■□□□□ 0.4
Trim27Q62158 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim27Q62158 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim27Q62158 Mir125a-201ENSMUST00000083545 68 ntBASIC17.54■□□□□ 0.4
Trim27Q62158 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim27Q62158 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trim27Q62158 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim27Q62158 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 57.8 ms