Protein–RNA interactions for Protein: Q62066

Phox2a, Paired mesoderm homeobox protein 2A, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Phox2aQ62066 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Phox2aQ62066 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Phox2aQ62066 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Phox2aQ62066 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Phox2aQ62066 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Phox2aQ62066 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Phox2aQ62066 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Phox2aQ62066 Gm27742-201ENSMUST00000184667 60 ntBASIC11.84□□□□□ -0.51
Phox2aQ62066 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC11.84□□□□□ -0.51
Phox2aQ62066 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Phox2aQ62066 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
Phox2aQ62066 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Phox2aQ62066 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Phox2aQ62066 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Phox2aQ62066 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC11.84□□□□□ -0.51
Phox2aQ62066 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Phox2aQ62066 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Phox2aQ62066 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Phox2aQ62066 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Phox2aQ62066 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Phox2aQ62066 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Phox2aQ62066 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Phox2aQ62066 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC11.84□□□□□ -0.51
Phox2aQ62066 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Phox2aQ62066 Gm44414-201ENSMUST00000203660 2109 ntBASIC11.84□□□□□ -0.51
Phox2aQ62066 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Phox2aQ62066 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Phox2aQ62066 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Phox2aQ62066 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Phox2aQ62066 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Phox2aQ62066 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Phox2aQ62066 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Phox2aQ62066 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.51
Phox2aQ62066 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.51
Phox2aQ62066 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Phox2aQ62066 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Phox2aQ62066 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Phox2aQ62066 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Phox2aQ62066 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Phox2aQ62066 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Phox2aQ62066 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Phox2aQ62066 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Phox2aQ62066 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Phox2aQ62066 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC11.83□□□□□ -0.52
Phox2aQ62066 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Phox2aQ62066 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Phox2aQ62066 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
Phox2aQ62066 Gm7977-201ENSMUST00000193787 748 ntBASIC11.83□□□□□ -0.52
Phox2aQ62066 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Phox2aQ62066 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Phox2aQ62066 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC11.83□□□□□ -0.52
Phox2aQ62066 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Phox2aQ62066 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Phox2aQ62066 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Phox2aQ62066 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.52
Phox2aQ62066 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Phox2aQ62066 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Phox2aQ62066 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Phox2aQ62066 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.52
Phox2aQ62066 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Phox2aQ62066 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.52
Phox2aQ62066 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Phox2aQ62066 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Phox2aQ62066 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Phox2aQ62066 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Phox2aQ62066 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Phox2aQ62066 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Phox2aQ62066 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Phox2aQ62066 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Phox2aQ62066 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Phox2aQ62066 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Phox2aQ62066 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC11.82□□□□□ -0.52
Phox2aQ62066 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Phox2aQ62066 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Phox2aQ62066 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Phox2aQ62066 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Phox2aQ62066 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Phox2aQ62066 Gm44241-201ENSMUST00000203230 1662 ntBASIC11.82□□□□□ -0.52
Phox2aQ62066 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Phox2aQ62066 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Phox2aQ62066 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Phox2aQ62066 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC11.82□□□□□ -0.52
Phox2aQ62066 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC11.82□□□□□ -0.52
Phox2aQ62066 Gm33142-201ENSMUST00000193913 867 ntBASIC11.82□□□□□ -0.52
Phox2aQ62066 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Phox2aQ62066 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Phox2aQ62066 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Phox2aQ62066 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC11.82□□□□□ -0.52
Phox2aQ62066 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Phox2aQ62066 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Phox2aQ62066 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Phox2aQ62066 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Phox2aQ62066 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC11.82□□□□□ -0.52
Phox2aQ62066 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Phox2aQ62066 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Phox2aQ62066 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Phox2aQ62066 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Phox2aQ62066 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC11.82□□□□□ -0.52
Phox2aQ62066 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Phox2aQ62066 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms