Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Sox17Q61473 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Sox17Q61473 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC13.44□□□□□ -0.26
Sox17Q61473 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC13.44□□□□□ -0.26
Sox17Q61473 Gm4691-201ENSMUST00000182339 1000 ntBASIC13.44□□□□□ -0.26
Sox17Q61473 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC13.44□□□□□ -0.26
Sox17Q61473 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC13.44□□□□□ -0.26
Sox17Q61473 Gm6089-201ENSMUST00000197666 938 ntBASIC13.44□□□□□ -0.26
Sox17Q61473 Gm2451-201ENSMUST00000199447 999 ntBASIC13.44□□□□□ -0.26
Sox17Q61473 Gm10290-201ENSMUST00000200451 999 ntBASIC13.44□□□□□ -0.26
Sox17Q61473 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sox17Q61473 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC13.44□□□□□ -0.26
Sox17Q61473 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sox17Q61473 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sox17Q61473 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sox17Q61473 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Sox17Q61473 Ksr1-207ENSMUST00000226282 5260 ntBASIC13.44□□□□□ -0.26
Sox17Q61473 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sox17Q61473 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sox17Q61473 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sox17Q61473 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sox17Q61473 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Sox17Q61473 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sox17Q61473 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sox17Q61473 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sox17Q61473 Best4-ps-201ENSMUST00000129783 1380 ntBASIC13.44□□□□□ -0.26
Sox17Q61473 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Sox17Q61473 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sox17Q61473 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sox17Q61473 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sox17Q61473 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Sox17Q61473 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Sox17Q61473 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sox17Q61473 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Sox17Q61473 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Sox17Q61473 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sox17Q61473 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Sox17Q61473 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sox17Q61473 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sox17Q61473 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Sox17Q61473 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sox17Q61473 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC13.43□□□□□ -0.26
Sox17Q61473 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC13.43□□□□□ -0.26
Sox17Q61473 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Sox17Q61473 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC13.43□□□□□ -0.26
Sox17Q61473 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC13.43□□□□□ -0.26
Sox17Q61473 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC13.43□□□□□ -0.26
Sox17Q61473 Gm43935-201ENSMUST00000203569 1050 ntBASIC13.43□□□□□ -0.26
Sox17Q61473 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sox17Q61473 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sox17Q61473 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sox17Q61473 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sox17Q61473 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sox17Q61473 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sox17Q61473 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sox17Q61473 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sox17Q61473 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Sox17Q61473 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sox17Q61473 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sox17Q61473 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Sox17Q61473 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Sox17Q61473 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sox17Q61473 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sox17Q61473 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sox17Q61473 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sox17Q61473 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sox17Q61473 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sox17Q61473 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sox17Q61473 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Sox17Q61473 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sox17Q61473 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sox17Q61473 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Sox17Q61473 Gm37644-201ENSMUST00000192190 2270 ntBASIC13.42□□□□□ -0.26
Sox17Q61473 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sox17Q61473 Gm11405-201ENSMUST00000118689 1556 ntBASIC13.42□□□□□ -0.26
Sox17Q61473 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sox17Q61473 Gm37500-201ENSMUST00000192059 1443 ntBASIC13.42□□□□□ -0.26
Sox17Q61473 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sox17Q61473 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sox17Q61473 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sox17Q61473 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sox17Q61473 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC13.42□□□□□ -0.26
Sox17Q61473 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Sox17Q61473 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Sox17Q61473 Olfr286-202ENSMUST00000205305 969 ntBASIC13.42□□□□□ -0.26
Sox17Q61473 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Sox17Q61473 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC13.42□□□□□ -0.26
Sox17Q61473 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sox17Q61473 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sox17Q61473 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Sox17Q61473 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sox17Q61473 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Sox17Q61473 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sox17Q61473 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Sox17Q61473 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sox17Q61473 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Sox17Q61473 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Sox17Q61473 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC13.41□□□□□ -0.26
Sox17Q61473 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sox17Q61473 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms