Protein–RNA interactions for Protein: Q61466

Smarcd1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, mousemouse

Known RBP Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd1Q61466 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Smarcd1Q61466 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Smarcd1Q61466 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC14.89□□□□□ -0.03
Smarcd1Q61466 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Smarcd1Q61466 Gm14719-201ENSMUST00000121891 340 ntBASIC14.89□□□□□ -0.03
Smarcd1Q61466 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Smarcd1Q61466 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Smarcd1Q61466 Mir6977-201ENSMUST00000184960 64 ntBASIC14.89□□□□□ -0.03
Smarcd1Q61466 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC14.89□□□□□ -0.03
Smarcd1Q61466 Gm44608-201ENSMUST00000206827 855 ntBASIC14.89□□□□□ -0.03
Smarcd1Q61466 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC14.89□□□□□ -0.03
Smarcd1Q61466 AC132863.2-201ENSMUST00000226643 799 ntBASIC14.89□□□□□ -0.03
Smarcd1Q61466 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Smarcd1Q61466 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Smarcd1Q61466 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Smarcd1Q61466 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Smarcd1Q61466 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC14.89□□□□□ -0.03
Smarcd1Q61466 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Smarcd1Q61466 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Smarcd1Q61466 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Smarcd1Q61466 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Smarcd1Q61466 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Smarcd1Q61466 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Smarcd1Q61466 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Smarcd1Q61466 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Smarcd1Q61466 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Smarcd1Q61466 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Smarcd1Q61466 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Smarcd1Q61466 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Smarcd1Q61466 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Smarcd1Q61466 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC14.88□□□□□ -0.03
Smarcd1Q61466 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
Smarcd1Q61466 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Smarcd1Q61466 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Smarcd1Q61466 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Smarcd1Q61466 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC14.88□□□□□ -0.03
Smarcd1Q61466 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Smarcd1Q61466 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Smarcd1Q61466 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Smarcd1Q61466 AC125206.2-201ENSMUST00000217454 574 ntBASIC14.88□□□□□ -0.03
Smarcd1Q61466 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Smarcd1Q61466 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC14.88□□□□□ -0.03
Smarcd1Q61466 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Smarcd1Q61466 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Smarcd1Q61466 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Smarcd1Q61466 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC14.88□□□□□ -0.03
Smarcd1Q61466 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Smarcd1Q61466 Ap5m1-205ENSMUST00000227431 3757 ntBASIC14.88□□□□□ -0.03
Smarcd1Q61466 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Smarcd1Q61466 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Smarcd1Q61466 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Smarcd1Q61466 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Smarcd1Q61466 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Smarcd1Q61466 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Smarcd1Q61466 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Smarcd1Q61466 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Smarcd1Q61466 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smarcd1Q61466 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC14.87□□□□□ -0.03
Smarcd1Q61466 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smarcd1Q61466 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smarcd1Q61466 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smarcd1Q61466 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smarcd1Q61466 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smarcd1Q61466 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Smarcd1Q61466 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Smarcd1Q61466 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smarcd1Q61466 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Smarcd1Q61466 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smarcd1Q61466 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC14.87□□□□□ -0.03
Smarcd1Q61466 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smarcd1Q61466 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Smarcd1Q61466 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
Smarcd1Q61466 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Smarcd1Q61466 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC14.87□□□□□ -0.03
Smarcd1Q61466 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC14.87□□□□□ -0.03
Smarcd1Q61466 Ighv8-14-201ENSMUST00000196781 358 ntBASIC14.87□□□□□ -0.03
Smarcd1Q61466 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smarcd1Q61466 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC14.87□□□□□ -0.03
Smarcd1Q61466 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smarcd1Q61466 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smarcd1Q61466 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Smarcd1Q61466 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smarcd1Q61466 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smarcd1Q61466 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smarcd1Q61466 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smarcd1Q61466 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Smarcd1Q61466 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smarcd1Q61466 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smarcd1Q61466 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Smarcd1Q61466 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Smarcd1Q61466 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smarcd1Q61466 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Smarcd1Q61466 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC14.87□□□□□ -0.03
Smarcd1Q61466 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smarcd1Q61466 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Smarcd1Q61466 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Smarcd1Q61466 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Smarcd1Q61466 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Smarcd1Q61466 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Smarcd1Q61466 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms