Protein–RNA interactions for Protein: Q60769

Tnfaip3, Tumor necrosis factor alpha-induced protein 3, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfaip3Q60769 Gm27631-201ENSMUST00000184163 466 ntBASIC13.48□□□□□ -0.25
Tnfaip3Q60769 Gm45453-201ENSMUST00000211758 853 ntBASIC13.48□□□□□ -0.25
Tnfaip3Q60769 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Tnfaip3Q60769 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC13.48□□□□□ -0.25
Tnfaip3Q60769 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC13.48□□□□□ -0.25
Tnfaip3Q60769 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tnfaip3Q60769 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tnfaip3Q60769 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tnfaip3Q60769 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Tnfaip3Q60769 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC13.48□□□□□ -0.25
Tnfaip3Q60769 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tnfaip3Q60769 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tnfaip3Q60769 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Tnfaip3Q60769 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tnfaip3Q60769 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tnfaip3Q60769 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tnfaip3Q60769 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC13.48□□□□□ -0.25
Tnfaip3Q60769 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tnfaip3Q60769 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tnfaip3Q60769 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tnfaip3Q60769 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Tnfaip3Q60769 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tnfaip3Q60769 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Tnfaip3Q60769 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tnfaip3Q60769 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tnfaip3Q60769 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tnfaip3Q60769 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tnfaip3Q60769 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tnfaip3Q60769 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Tnfaip3Q60769 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tnfaip3Q60769 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Tnfaip3Q60769 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Tnfaip3Q60769 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC13.47□□□□□ -0.25
Tnfaip3Q60769 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Tnfaip3Q60769 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Tnfaip3Q60769 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC13.47□□□□□ -0.25
Tnfaip3Q60769 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC13.47□□□□□ -0.25
Tnfaip3Q60769 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC13.47□□□□□ -0.25
Tnfaip3Q60769 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Tnfaip3Q60769 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tnfaip3Q60769 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tnfaip3Q60769 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tnfaip3Q60769 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Tnfaip3Q60769 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Tnfaip3Q60769 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tnfaip3Q60769 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tnfaip3Q60769 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tnfaip3Q60769 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Tnfaip3Q60769 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Tnfaip3Q60769 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Tnfaip3Q60769 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tnfaip3Q60769 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Tnfaip3Q60769 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tnfaip3Q60769 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tnfaip3Q60769 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Tnfaip3Q60769 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Tnfaip3Q60769 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Tnfaip3Q60769 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Tnfaip3Q60769 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Tnfaip3Q60769 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Tnfaip3Q60769 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Tnfaip3Q60769 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Tnfaip3Q60769 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Tnfaip3Q60769 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.25
Tnfaip3Q60769 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Tnfaip3Q60769 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Tnfaip3Q60769 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC13.46□□□□□ -0.25
Tnfaip3Q60769 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Tnfaip3Q60769 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Tnfaip3Q60769 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Tnfaip3Q60769 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Tnfaip3Q60769 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Tnfaip3Q60769 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC13.46□□□□□ -0.25
Tnfaip3Q60769 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC13.46□□□□□ -0.25
Tnfaip3Q60769 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Tnfaip3Q60769 Gm27680-201ENSMUST00000184192 160 ntBASIC13.46□□□□□ -0.25
Tnfaip3Q60769 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Tnfaip3Q60769 AA619741-201ENSMUST00000195095 646 ntBASIC13.46□□□□□ -0.25
Tnfaip3Q60769 Gm44344-201ENSMUST00000200287 129 ntBASIC13.46□□□□□ -0.25
Tnfaip3Q60769 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Tnfaip3Q60769 AC149588.3-201ENSMUST00000227515 150 ntBASIC13.46□□□□□ -0.25
Tnfaip3Q60769 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Tnfaip3Q60769 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Tnfaip3Q60769 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Tnfaip3Q60769 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Tnfaip3Q60769 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Tnfaip3Q60769 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Tnfaip3Q60769 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Tnfaip3Q60769 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Tnfaip3Q60769 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC13.46□□□□□ -0.25
Tnfaip3Q60769 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Tnfaip3Q60769 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC13.46□□□□□ -0.25
Tnfaip3Q60769 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Tnfaip3Q60769 Gm43868-201ENSMUST00000205187 2114 ntBASIC13.46□□□□□ -0.26
Tnfaip3Q60769 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Tnfaip3Q60769 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Tnfaip3Q60769 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Tnfaip3Q60769 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
Tnfaip3Q60769 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Tnfaip3Q60769 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC13.46□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms