Protein–RNA interactions for Protein: Q5XFR0

Pabpn1l, Embryonic polyadenylate-binding protein 2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpn1lQ5XFR0 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pabpn1lQ5XFR0 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pabpn1lQ5XFR0 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pabpn1lQ5XFR0 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pabpn1lQ5XFR0 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC14.33□□□□□ -0.12
Pabpn1lQ5XFR0 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pabpn1lQ5XFR0 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pabpn1lQ5XFR0 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pabpn1lQ5XFR0 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC14.33□□□□□ -0.12
Pabpn1lQ5XFR0 Gm18622-201ENSMUST00000219361 595 ntBASIC14.33□□□□□ -0.12
Pabpn1lQ5XFR0 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC14.33□□□□□ -0.12
Pabpn1lQ5XFR0 AC133598.3-202ENSMUST00000224219 531 ntBASIC14.33□□□□□ -0.12
Pabpn1lQ5XFR0 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Pabpn1lQ5XFR0 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pabpn1lQ5XFR0 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Pabpn1lQ5XFR0 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pabpn1lQ5XFR0 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pabpn1lQ5XFR0 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC14.33□□□□□ -0.12
Pabpn1lQ5XFR0 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pabpn1lQ5XFR0 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC14.33□□□□□ -0.12
Pabpn1lQ5XFR0 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pabpn1lQ5XFR0 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pabpn1lQ5XFR0 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pabpn1lQ5XFR0 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pabpn1lQ5XFR0 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC14.33□□□□□ -0.12
Pabpn1lQ5XFR0 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Pabpn1lQ5XFR0 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pabpn1lQ5XFR0 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Pabpn1lQ5XFR0 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pabpn1lQ5XFR0 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pabpn1lQ5XFR0 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Pabpn1lQ5XFR0 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pabpn1lQ5XFR0 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pabpn1lQ5XFR0 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pabpn1lQ5XFR0 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
Pabpn1lQ5XFR0 Gm13312-201ENSMUST00000119631 718 ntBASIC14.32□□□□□ -0.12
Pabpn1lQ5XFR0 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC14.32□□□□□ -0.12
Pabpn1lQ5XFR0 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC14.32□□□□□ -0.12
Pabpn1lQ5XFR0 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC14.32□□□□□ -0.12
Pabpn1lQ5XFR0 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Pabpn1lQ5XFR0 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
Pabpn1lQ5XFR0 Vti1a-206ENSMUST00000225529 1244 ntBASIC14.32□□□□□ -0.12
Pabpn1lQ5XFR0 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pabpn1lQ5XFR0 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pabpn1lQ5XFR0 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pabpn1lQ5XFR0 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pabpn1lQ5XFR0 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pabpn1lQ5XFR0 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pabpn1lQ5XFR0 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pabpn1lQ5XFR0 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pabpn1lQ5XFR0 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pabpn1lQ5XFR0 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Pabpn1lQ5XFR0 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Pabpn1lQ5XFR0 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Pabpn1lQ5XFR0 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Pabpn1lQ5XFR0 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pabpn1lQ5XFR0 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
Pabpn1lQ5XFR0 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pabpn1lQ5XFR0 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Pabpn1lQ5XFR0 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Pabpn1lQ5XFR0 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pabpn1lQ5XFR0 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pabpn1lQ5XFR0 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pabpn1lQ5XFR0 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pabpn1lQ5XFR0 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pabpn1lQ5XFR0 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pabpn1lQ5XFR0 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pabpn1lQ5XFR0 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
Pabpn1lQ5XFR0 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pabpn1lQ5XFR0 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pabpn1lQ5XFR0 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pabpn1lQ5XFR0 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Pabpn1lQ5XFR0 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC14.31□□□□□ -0.12
Pabpn1lQ5XFR0 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Pabpn1lQ5XFR0 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
Pabpn1lQ5XFR0 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Pabpn1lQ5XFR0 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
Pabpn1lQ5XFR0 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC14.31□□□□□ -0.12
Pabpn1lQ5XFR0 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Pabpn1lQ5XFR0 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC14.31□□□□□ -0.12
Pabpn1lQ5XFR0 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC14.31□□□□□ -0.12
Pabpn1lQ5XFR0 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC14.31□□□□□ -0.12
Pabpn1lQ5XFR0 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pabpn1lQ5XFR0 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Pabpn1lQ5XFR0 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Pabpn1lQ5XFR0 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Pabpn1lQ5XFR0 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pabpn1lQ5XFR0 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Pabpn1lQ5XFR0 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pabpn1lQ5XFR0 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Pabpn1lQ5XFR0 Mmp14-206ENSMUST00000225641 3238 ntBASIC14.31□□□□□ -0.12
Pabpn1lQ5XFR0 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Pabpn1lQ5XFR0 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Pabpn1lQ5XFR0 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC14.31□□□□□ -0.12
Pabpn1lQ5XFR0 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pabpn1lQ5XFR0 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pabpn1lQ5XFR0 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pabpn1lQ5XFR0 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC14.3□□□□□ -0.12
Pabpn1lQ5XFR0 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pabpn1lQ5XFR0 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms