Protein–RNA interactions for Protein: Q5SP85

Ccdc85a, Coiled-coil domain-containing protein 85A, mousemouse

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85aQ5SP85 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ccdc85aQ5SP85 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Ccdc85aQ5SP85 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Ccdc85aQ5SP85 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ccdc85aQ5SP85 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC15.74■□□□□ 0.11
Ccdc85aQ5SP85 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ccdc85aQ5SP85 Mir1247-201ENSMUST00000116706 82 ntBASIC15.74■□□□□ 0.11
Ccdc85aQ5SP85 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC15.74■□□□□ 0.11
Ccdc85aQ5SP85 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Ccdc85aQ5SP85 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC15.74■□□□□ 0.11
Ccdc85aQ5SP85 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Ccdc85aQ5SP85 Gm27731-201ENSMUST00000185192 107 ntBASIC15.74■□□□□ 0.11
Ccdc85aQ5SP85 Gm9728-201ENSMUST00000200197 1055 ntBASIC15.74■□□□□ 0.11
Ccdc85aQ5SP85 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC15.74■□□□□ 0.11
Ccdc85aQ5SP85 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ccdc85aQ5SP85 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Ccdc85aQ5SP85 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC15.74■□□□□ 0.11
Ccdc85aQ5SP85 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC15.74■□□□□ 0.11
Ccdc85aQ5SP85 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Ccdc85aQ5SP85 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Ccdc85aQ5SP85 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ccdc85aQ5SP85 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ccdc85aQ5SP85 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ccdc85aQ5SP85 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Ccdc85aQ5SP85 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ccdc85aQ5SP85 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ccdc85aQ5SP85 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ccdc85aQ5SP85 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ccdc85aQ5SP85 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ccdc85aQ5SP85 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ccdc85aQ5SP85 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
Ccdc85aQ5SP85 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ccdc85aQ5SP85 Gm11661-201ENSMUST00000121761 1327 ntBASIC15.73■□□□□ 0.11
Ccdc85aQ5SP85 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ccdc85aQ5SP85 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ccdc85aQ5SP85 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ccdc85aQ5SP85 AC093043.3-201ENSMUST00000226531 2273 ntBASIC15.73■□□□□ 0.11
Ccdc85aQ5SP85 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ccdc85aQ5SP85 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ccdc85aQ5SP85 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC15.73■□□□□ 0.11
Ccdc85aQ5SP85 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Ccdc85aQ5SP85 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Ccdc85aQ5SP85 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC15.73■□□□□ 0.11
Ccdc85aQ5SP85 5830487J09Rik-201ENSMUST00000198600 1256 ntTSL 5 BASIC15.73■□□□□ 0.11
Ccdc85aQ5SP85 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Ccdc85aQ5SP85 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Ccdc85aQ5SP85 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ccdc85aQ5SP85 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ccdc85aQ5SP85 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ccdc85aQ5SP85 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ccdc85aQ5SP85 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ccdc85aQ5SP85 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Ccdc85aQ5SP85 Gm42853-201ENSMUST00000201273 1387 ntBASIC15.73■□□□□ 0.11
Ccdc85aQ5SP85 AL645783.1-201ENSMUST00000221416 1832 ntBASIC15.73■□□□□ 0.11
Ccdc85aQ5SP85 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ccdc85aQ5SP85 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ccdc85aQ5SP85 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ccdc85aQ5SP85 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC15.72■□□□□ 0.11
Ccdc85aQ5SP85 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ccdc85aQ5SP85 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ccdc85aQ5SP85 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Ccdc85aQ5SP85 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC15.72■□□□□ 0.11
Ccdc85aQ5SP85 Gm14660-201ENSMUST00000119809 575 ntBASIC15.72■□□□□ 0.11
Ccdc85aQ5SP85 Snora78-201ENSMUST00000158630 128 ntBASIC15.72■□□□□ 0.11
Ccdc85aQ5SP85 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC15.72■□□□□ 0.11
Ccdc85aQ5SP85 Gm8652-201ENSMUST00000181363 964 ntBASIC15.72■□□□□ 0.11
Ccdc85aQ5SP85 Gm27847-201ENSMUST00000183711 107 ntBASIC15.72■□□□□ 0.11
Ccdc85aQ5SP85 Gm27375-201ENSMUST00000183799 107 ntBASIC15.72■□□□□ 0.11
Ccdc85aQ5SP85 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ccdc85aQ5SP85 5830411K02Rik-201ENSMUST00000200000 997 ntBASIC15.72■□□□□ 0.11
Ccdc85aQ5SP85 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ccdc85aQ5SP85 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Ccdc85aQ5SP85 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ccdc85aQ5SP85 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ccdc85aQ5SP85 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC15.72■□□□□ 0.11
Ccdc85aQ5SP85 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Ccdc85aQ5SP85 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
Ccdc85aQ5SP85 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ccdc85aQ5SP85 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ccdc85aQ5SP85 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ccdc85aQ5SP85 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Ccdc85aQ5SP85 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ccdc85aQ5SP85 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ccdc85aQ5SP85 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ccdc85aQ5SP85 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ccdc85aQ5SP85 Ccdc166-201ENSMUST00000182172 2584 ntBASIC15.72■□□□□ 0.11
Ccdc85aQ5SP85 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Ccdc85aQ5SP85 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ccdc85aQ5SP85 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ccdc85aQ5SP85 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ccdc85aQ5SP85 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ccdc85aQ5SP85 Gm37166-201ENSMUST00000195473 2474 ntBASIC15.71■□□□□ 0.11
Ccdc85aQ5SP85 Gm43598-201ENSMUST00000202482 2479 ntBASIC15.71■□□□□ 0.11
Ccdc85aQ5SP85 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ccdc85aQ5SP85 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Ccdc85aQ5SP85 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ccdc85aQ5SP85 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ccdc85aQ5SP85 Gm15198-201ENSMUST00000117283 177 ntBASIC15.71■□□□□ 0.11
Ccdc85aQ5SP85 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ccdc85aQ5SP85 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC15.71■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms