Protein–RNA interactions for Protein: Q571H0

Urb1, Nucleolar pre-ribosomal-associated protein 1, mousemouse

Known RBP Predictions only

Length 2,274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Urb1Q571H0 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Urb1Q571H0 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Urb1Q571H0 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Urb1Q571H0 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Urb1Q571H0 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Urb1Q571H0 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Urb1Q571H0 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Urb1Q571H0 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Urb1Q571H0 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC13.17□□□□□ -0.3
Urb1Q571H0 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Urb1Q571H0 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
Urb1Q571H0 Gm8835-201ENSMUST00000173096 1169 ntBASIC13.16□□□□□ -0.3
Urb1Q571H0 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Urb1Q571H0 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC13.16□□□□□ -0.3
Urb1Q571H0 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC13.16□□□□□ -0.3
Urb1Q571H0 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Urb1Q571H0 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Urb1Q571H0 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Urb1Q571H0 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Urb1Q571H0 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Urb1Q571H0 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Urb1Q571H0 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Urb1Q571H0 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Urb1Q571H0 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Urb1Q571H0 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Urb1Q571H0 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Urb1Q571H0 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Urb1Q571H0 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC13.16□□□□□ -0.3
Urb1Q571H0 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC13.16□□□□□ -0.3
Urb1Q571H0 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Urb1Q571H0 Gm5279-201ENSMUST00000199575 745 ntBASIC13.16□□□□□ -0.3
Urb1Q571H0 Gm45453-201ENSMUST00000211758 853 ntBASIC13.16□□□□□ -0.3
Urb1Q571H0 AC121804.3-201ENSMUST00000223420 295 ntBASIC13.16□□□□□ -0.3
Urb1Q571H0 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Urb1Q571H0 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
Urb1Q571H0 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Urb1Q571H0 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Urb1Q571H0 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC13.16□□□□□ -0.3
Urb1Q571H0 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Urb1Q571H0 Gm43195-201ENSMUST00000200614 2332 ntBASIC13.16□□□□□ -0.3
Urb1Q571H0 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Urb1Q571H0 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Urb1Q571H0 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Urb1Q571H0 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Urb1Q571H0 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Urb1Q571H0 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Urb1Q571H0 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Urb1Q571H0 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
Urb1Q571H0 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Urb1Q571H0 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Urb1Q571H0 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC13.15□□□□□ -0.3
Urb1Q571H0 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Urb1Q571H0 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Urb1Q571H0 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Urb1Q571H0 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC13.15□□□□□ -0.3
Urb1Q571H0 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC13.15□□□□□ -0.3
Urb1Q571H0 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Urb1Q571H0 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Urb1Q571H0 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Urb1Q571H0 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Urb1Q571H0 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Urb1Q571H0 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Urb1Q571H0 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC13.15□□□□□ -0.3
Urb1Q571H0 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Urb1Q571H0 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Urb1Q571H0 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Urb1Q571H0 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC13.15□□□□□ -0.3
Urb1Q571H0 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Urb1Q571H0 Gm2495-201ENSMUST00000191160 466 ntBASIC13.15□□□□□ -0.3
Urb1Q571H0 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC13.15□□□□□ -0.3
Urb1Q571H0 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Urb1Q571H0 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Urb1Q571H0 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Urb1Q571H0 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Urb1Q571H0 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Urb1Q571H0 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Urb1Q571H0 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Urb1Q571H0 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Urb1Q571H0 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Urb1Q571H0 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Urb1Q571H0 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Urb1Q571H0 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Urb1Q571H0 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Urb1Q571H0 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Urb1Q571H0 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Urb1Q571H0 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Urb1Q571H0 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Urb1Q571H0 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Urb1Q571H0 AC114008.2-201ENSMUST00000227699 1347 ntBASIC13.14□□□□□ -0.31
Urb1Q571H0 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Urb1Q571H0 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC13.14□□□□□ -0.31
Urb1Q571H0 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Urb1Q571H0 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Urb1Q571H0 Gm10478-201ENSMUST00000084451 396 ntBASIC13.14□□□□□ -0.31
Urb1Q571H0 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
Urb1Q571H0 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Urb1Q571H0 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Urb1Q571H0 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Urb1Q571H0 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC13.14□□□□□ -0.31
Urb1Q571H0 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms