Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scn2bQ56A07 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scn2bQ56A07 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scn2bQ56A07 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scn2bQ56A07 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scn2bQ56A07 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Scn2bQ56A07 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC14.16□□□□□ -0.14
Scn2bQ56A07 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC14.16□□□□□ -0.14
Scn2bQ56A07 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Scn2bQ56A07 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC14.16□□□□□ -0.14
Scn2bQ56A07 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scn2bQ56A07 Gm14042-201ENSMUST00000120139 833 ntBASIC14.16□□□□□ -0.14
Scn2bQ56A07 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC14.16□□□□□ -0.14
Scn2bQ56A07 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC14.16□□□□□ -0.14
Scn2bQ56A07 Gm37935-201ENSMUST00000192012 982 ntBASIC14.16□□□□□ -0.14
Scn2bQ56A07 Gm37230-201ENSMUST00000194491 818 ntBASIC14.16□□□□□ -0.14
Scn2bQ56A07 Gm44492-201ENSMUST00000197012 141 ntBASIC14.16□□□□□ -0.14
Scn2bQ56A07 CT943659.1-201ENSMUST00000215459 326 ntBASIC14.16□□□□□ -0.14
Scn2bQ56A07 AC159295.1-201ENSMUST00000225326 940 ntBASIC14.16□□□□□ -0.14
Scn2bQ56A07 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC14.16□□□□□ -0.14
Scn2bQ56A07 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scn2bQ56A07 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC14.16□□□□□ -0.14
Scn2bQ56A07 Gm10154-201ENSMUST00000084445 354 ntBASIC14.16□□□□□ -0.14
Scn2bQ56A07 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scn2bQ56A07 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scn2bQ56A07 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scn2bQ56A07 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Scn2bQ56A07 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Scn2bQ56A07 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scn2bQ56A07 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scn2bQ56A07 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Scn2bQ56A07 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scn2bQ56A07 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scn2bQ56A07 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scn2bQ56A07 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scn2bQ56A07 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scn2bQ56A07 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scn2bQ56A07 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Scn2bQ56A07 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC14.15□□□□□ -0.14
Scn2bQ56A07 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Scn2bQ56A07 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Scn2bQ56A07 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Scn2bQ56A07 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Scn2bQ56A07 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Scn2bQ56A07 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Scn2bQ56A07 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
Scn2bQ56A07 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Scn2bQ56A07 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
Scn2bQ56A07 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Scn2bQ56A07 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Scn2bQ56A07 Gm4913-201ENSMUST00000117075 1290 ntBASIC14.15□□□□□ -0.14
Scn2bQ56A07 Gm9385-201ENSMUST00000117563 472 ntBASIC14.15□□□□□ -0.14
Scn2bQ56A07 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Scn2bQ56A07 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Scn2bQ56A07 Gm5177-201ENSMUST00000183092 997 ntBASIC14.15□□□□□ -0.14
Scn2bQ56A07 Gm17968-201ENSMUST00000194902 784 ntBASIC14.15□□□□□ -0.14
Scn2bQ56A07 Gm43073-201ENSMUST00000198200 1189 ntBASIC14.15□□□□□ -0.14
Scn2bQ56A07 Thap2-203ENSMUST00000218989 527 ntBASIC14.15□□□□□ -0.14
Scn2bQ56A07 Ndufaf2-202ENSMUST00000223734 556 ntBASIC14.15□□□□□ -0.14
Scn2bQ56A07 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Scn2bQ56A07 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Scn2bQ56A07 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Scn2bQ56A07 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Scn2bQ56A07 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Scn2bQ56A07 Gm38102-201ENSMUST00000192791 1935 ntBASIC14.15□□□□□ -0.14
Scn2bQ56A07 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Scn2bQ56A07 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Scn2bQ56A07 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC14.15□□□□□ -0.14
Scn2bQ56A07 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Scn2bQ56A07 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scn2bQ56A07 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Scn2bQ56A07 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Scn2bQ56A07 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC14.14□□□□□ -0.15
Scn2bQ56A07 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Scn2bQ56A07 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scn2bQ56A07 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scn2bQ56A07 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scn2bQ56A07 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scn2bQ56A07 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scn2bQ56A07 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scn2bQ56A07 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Scn2bQ56A07 Gm6944-201ENSMUST00000182449 1006 ntBASIC14.14□□□□□ -0.15
Scn2bQ56A07 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC14.14□□□□□ -0.15
Scn2bQ56A07 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scn2bQ56A07 AC225888.1-201ENSMUST00000227184 728 ntBASIC14.14□□□□□ -0.15
Scn2bQ56A07 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scn2bQ56A07 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scn2bQ56A07 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Scn2bQ56A07 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scn2bQ56A07 Gm6159-201ENSMUST00000191249 1724 ntBASIC14.14□□□□□ -0.15
Scn2bQ56A07 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scn2bQ56A07 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scn2bQ56A07 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scn2bQ56A07 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Scn2bQ56A07 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scn2bQ56A07 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Scn2bQ56A07 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scn2bQ56A07 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scn2bQ56A07 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scn2bQ56A07 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms