Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rc3h1Q4VGL6 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rc3h1Q4VGL6 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Rc3h1Q4VGL6 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Rc3h1Q4VGL6 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rc3h1Q4VGL6 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Rc3h1Q4VGL6 Gm12585-201ENSMUST00000117307 290 ntBASIC16.5■□□□□ 0.23
Rc3h1Q4VGL6 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC16.5■□□□□ 0.23
Rc3h1Q4VGL6 Gm15393-201ENSMUST00000120499 219 ntBASIC16.5■□□□□ 0.23
Rc3h1Q4VGL6 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rc3h1Q4VGL6 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC16.5■□□□□ 0.23
Rc3h1Q4VGL6 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rc3h1Q4VGL6 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC16.5■□□□□ 0.23
Rc3h1Q4VGL6 Arhgef33-209ENSMUST00000225223 714 ntBASIC16.5■□□□□ 0.23
Rc3h1Q4VGL6 Gm9797-201ENSMUST00000052902 613 ntBASIC16.5■□□□□ 0.23
Rc3h1Q4VGL6 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Rc3h1Q4VGL6 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Rc3h1Q4VGL6 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC16.5■□□□□ 0.23
Rc3h1Q4VGL6 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rc3h1Q4VGL6 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Rc3h1Q4VGL6 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rc3h1Q4VGL6 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rc3h1Q4VGL6 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rc3h1Q4VGL6 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Rc3h1Q4VGL6 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Rc3h1Q4VGL6 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC16.49■□□□□ 0.23
Rc3h1Q4VGL6 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rc3h1Q4VGL6 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Rc3h1Q4VGL6 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rc3h1Q4VGL6 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rc3h1Q4VGL6 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rc3h1Q4VGL6 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rc3h1Q4VGL6 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rc3h1Q4VGL6 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
Rc3h1Q4VGL6 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Rc3h1Q4VGL6 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC16.49■□□□□ 0.23
Rc3h1Q4VGL6 AC153872.1-201ENSMUST00000199539 128 ntBASIC16.49■□□□□ 0.23
Rc3h1Q4VGL6 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC16.49■□□□□ 0.23
Rc3h1Q4VGL6 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Rc3h1Q4VGL6 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Rc3h1Q4VGL6 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC16.49■□□□□ 0.23
Rc3h1Q4VGL6 AC154806.6-201ENSMUST00000228192 202 ntBASIC16.49■□□□□ 0.23
Rc3h1Q4VGL6 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rc3h1Q4VGL6 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Rc3h1Q4VGL6 Ptprs-211ENSMUST00000223859 5588 ntBASIC16.49■□□□□ 0.23
Rc3h1Q4VGL6 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rc3h1Q4VGL6 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Rc3h1Q4VGL6 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rc3h1Q4VGL6 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rc3h1Q4VGL6 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC16.49■□□□□ 0.23
Rc3h1Q4VGL6 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rc3h1Q4VGL6 Gm45630-201ENSMUST00000210243 1911 ntBASIC16.49■□□□□ 0.23
Rc3h1Q4VGL6 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rc3h1Q4VGL6 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rc3h1Q4VGL6 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rc3h1Q4VGL6 AC162938.1-201ENSMUST00000213140 2323 ntBASIC16.48■□□□□ 0.23
Rc3h1Q4VGL6 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rc3h1Q4VGL6 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC16.48■□□□□ 0.23
Rc3h1Q4VGL6 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rc3h1Q4VGL6 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rc3h1Q4VGL6 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rc3h1Q4VGL6 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rc3h1Q4VGL6 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Rc3h1Q4VGL6 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
Rc3h1Q4VGL6 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC16.48■□□□□ 0.23
Rc3h1Q4VGL6 Gm5745-201ENSMUST00000183748 313 ntBASIC16.48■□□□□ 0.23
Rc3h1Q4VGL6 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC16.48■□□□□ 0.23
Rc3h1Q4VGL6 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC16.48■□□□□ 0.23
Rc3h1Q4VGL6 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rc3h1Q4VGL6 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Rc3h1Q4VGL6 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rc3h1Q4VGL6 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
Rc3h1Q4VGL6 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rc3h1Q4VGL6 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rc3h1Q4VGL6 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rc3h1Q4VGL6 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rc3h1Q4VGL6 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Rc3h1Q4VGL6 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC16.48■□□□□ 0.23
Rc3h1Q4VGL6 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC16.48■□□□□ 0.23
Rc3h1Q4VGL6 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rc3h1Q4VGL6 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC16.48■□□□□ 0.23
Rc3h1Q4VGL6 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rc3h1Q4VGL6 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rc3h1Q4VGL6 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rc3h1Q4VGL6 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Rc3h1Q4VGL6 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rc3h1Q4VGL6 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rc3h1Q4VGL6 Gm37912-201ENSMUST00000191895 3076 ntBASIC16.47■□□□□ 0.23
Rc3h1Q4VGL6 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Rc3h1Q4VGL6 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Rc3h1Q4VGL6 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Rc3h1Q4VGL6 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rc3h1Q4VGL6 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rc3h1Q4VGL6 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Rc3h1Q4VGL6 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Rc3h1Q4VGL6 Gm14928-201ENSMUST00000120198 477 ntBASIC16.47■□□□□ 0.23
Rc3h1Q4VGL6 Gm11424-201ENSMUST00000121929 829 ntBASIC16.47■□□□□ 0.23
Rc3h1Q4VGL6 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC16.47■□□□□ 0.23
Rc3h1Q4VGL6 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC16.47■□□□□ 0.23
Rc3h1Q4VGL6 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC16.47■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms