Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trim43aQ3TL54 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim43aQ3TL54 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim43aQ3TL54 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trim43aQ3TL54 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim43aQ3TL54 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim43aQ3TL54 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trim43aQ3TL54 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trim43aQ3TL54 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trim43aQ3TL54 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim43aQ3TL54 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim43aQ3TL54 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trim43aQ3TL54 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim43aQ3TL54 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim43aQ3TL54 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim43aQ3TL54 Gm13036-201ENSMUST00000117799 748 ntBASIC15.18■□□□□ 0.02
Trim43aQ3TL54 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC15.18■□□□□ 0.02
Trim43aQ3TL54 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC15.18■□□□□ 0.02
Trim43aQ3TL54 AC102291.3-201ENSMUST00000226566 405 ntBASIC15.18■□□□□ 0.02
Trim43aQ3TL54 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Trim43aQ3TL54 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim43aQ3TL54 Gm15590-201ENSMUST00000078419 552 ntBASIC15.18■□□□□ 0.02
Trim43aQ3TL54 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trim43aQ3TL54 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim43aQ3TL54 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim43aQ3TL54 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC15.18■□□□□ 0.02
Trim43aQ3TL54 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim43aQ3TL54 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim43aQ3TL54 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim43aQ3TL54 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trim43aQ3TL54 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim43aQ3TL54 Gm6159-201ENSMUST00000191249 1724 ntBASIC15.17■□□□□ 0.02
Trim43aQ3TL54 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim43aQ3TL54 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trim43aQ3TL54 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim43aQ3TL54 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim43aQ3TL54 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim43aQ3TL54 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim43aQ3TL54 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim43aQ3TL54 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Trim43aQ3TL54 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim43aQ3TL54 AC121801.1-201ENSMUST00000225363 1899 ntBASIC15.17■□□□□ 0.02
Trim43aQ3TL54 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim43aQ3TL54 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Trim43aQ3TL54 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim43aQ3TL54 Gm6184-201ENSMUST00000120403 1261 ntBASIC15.17■□□□□ 0.02
Trim43aQ3TL54 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC15.17■□□□□ 0.02
Trim43aQ3TL54 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Trim43aQ3TL54 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC15.17■□□□□ 0.02
Trim43aQ3TL54 AC084391.1-201ENSMUST00000200651 141 ntBASIC15.17■□□□□ 0.02
Trim43aQ3TL54 Gm9182-201ENSMUST00000217829 639 ntBASIC15.17■□□□□ 0.02
Trim43aQ3TL54 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim43aQ3TL54 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim43aQ3TL54 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC15.17■□□□□ 0.02
Trim43aQ3TL54 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC15.17■□□□□ 0.02
Trim43aQ3TL54 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim43aQ3TL54 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trim43aQ3TL54 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC15.17■□□□□ 0.02
Trim43aQ3TL54 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim43aQ3TL54 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trim43aQ3TL54 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC15.17■□□□□ 0.02
Trim43aQ3TL54 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim43aQ3TL54 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trim43aQ3TL54 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trim43aQ3TL54 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim43aQ3TL54 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trim43aQ3TL54 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim43aQ3TL54 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim43aQ3TL54 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim43aQ3TL54 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim43aQ3TL54 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trim43aQ3TL54 Gm18244-201ENSMUST00000219747 1566 ntBASIC15.16■□□□□ 0.02
Trim43aQ3TL54 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Trim43aQ3TL54 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Trim43aQ3TL54 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim43aQ3TL54 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC15.16■□□□□ 0.02
Trim43aQ3TL54 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim43aQ3TL54 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC15.16■□□□□ 0.02
Trim43aQ3TL54 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trim43aQ3TL54 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Trim43aQ3TL54 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC15.16■□□□□ 0.02
Trim43aQ3TL54 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim43aQ3TL54 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC15.16■□□□□ 0.02
Trim43aQ3TL54 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trim43aQ3TL54 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC15.16■□□□□ 0.02
Trim43aQ3TL54 Gm5712-201ENSMUST00000199748 1043 ntBASIC15.16■□□□□ 0.02
Trim43aQ3TL54 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim43aQ3TL54 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim43aQ3TL54 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim43aQ3TL54 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim43aQ3TL54 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim43aQ3TL54 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trim43aQ3TL54 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim43aQ3TL54 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
Trim43aQ3TL54 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim43aQ3TL54 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trim43aQ3TL54 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC15.16■□□□□ 0.02
Trim43aQ3TL54 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim43aQ3TL54 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim43aQ3TL54 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms