Protein–RNA interactions for Protein: Q3MI99

Ccbe1, Collagen and calcium-binding EGF domain-containing protein 1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccbe1Q3MI99 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Ccbe1Q3MI99 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Ccbe1Q3MI99 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Ccbe1Q3MI99 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Ccbe1Q3MI99 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Ccbe1Q3MI99 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ccbe1Q3MI99 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Ccbe1Q3MI99 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ccbe1Q3MI99 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.34
Ccbe1Q3MI99 Grk6-207ENSMUST00000225925 2769 ntBASIC12.96□□□□□ -0.34
Ccbe1Q3MI99 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Ccbe1Q3MI99 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Ccbe1Q3MI99 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ccbe1Q3MI99 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ccbe1Q3MI99 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ccbe1Q3MI99 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ccbe1Q3MI99 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ccbe1Q3MI99 Gm27194-201ENSMUST00000175753 2936 ntBASIC12.95□□□□□ -0.34
Ccbe1Q3MI99 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccbe1Q3MI99 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccbe1Q3MI99 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ccbe1Q3MI99 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccbe1Q3MI99 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Ccbe1Q3MI99 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC12.95□□□□□ -0.34
Ccbe1Q3MI99 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Ccbe1Q3MI99 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC12.95□□□□□ -0.34
Ccbe1Q3MI99 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Ccbe1Q3MI99 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccbe1Q3MI99 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ccbe1Q3MI99 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Ccbe1Q3MI99 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccbe1Q3MI99 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Ccbe1Q3MI99 Gm16061-201ENSMUST00000122167 857 ntBASIC12.95□□□□□ -0.34
Ccbe1Q3MI99 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ccbe1Q3MI99 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC12.95□□□□□ -0.34
Ccbe1Q3MI99 Gm7213-201ENSMUST00000215977 950 ntBASIC12.95□□□□□ -0.34
Ccbe1Q3MI99 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC12.95□□□□□ -0.34
Ccbe1Q3MI99 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccbe1Q3MI99 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccbe1Q3MI99 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccbe1Q3MI99 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccbe1Q3MI99 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ccbe1Q3MI99 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Ccbe1Q3MI99 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Ccbe1Q3MI99 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccbe1Q3MI99 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccbe1Q3MI99 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccbe1Q3MI99 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC12.95□□□□□ -0.34
Ccbe1Q3MI99 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccbe1Q3MI99 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccbe1Q3MI99 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccbe1Q3MI99 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccbe1Q3MI99 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Ccbe1Q3MI99 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Ccbe1Q3MI99 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Ccbe1Q3MI99 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccbe1Q3MI99 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC12.94□□□□□ -0.34
Ccbe1Q3MI99 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccbe1Q3MI99 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccbe1Q3MI99 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccbe1Q3MI99 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC12.94□□□□□ -0.34
Ccbe1Q3MI99 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ccbe1Q3MI99 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ccbe1Q3MI99 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccbe1Q3MI99 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccbe1Q3MI99 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccbe1Q3MI99 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC12.94□□□□□ -0.34
Ccbe1Q3MI99 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ccbe1Q3MI99 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC12.94□□□□□ -0.34
Ccbe1Q3MI99 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC12.94□□□□□ -0.34
Ccbe1Q3MI99 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC12.94□□□□□ -0.34
Ccbe1Q3MI99 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Ccbe1Q3MI99 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ccbe1Q3MI99 AC155729.1-201ENSMUST00000227758 544 ntBASIC12.94□□□□□ -0.34
Ccbe1Q3MI99 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccbe1Q3MI99 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccbe1Q3MI99 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ccbe1Q3MI99 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccbe1Q3MI99 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccbe1Q3MI99 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ccbe1Q3MI99 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ccbe1Q3MI99 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccbe1Q3MI99 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccbe1Q3MI99 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccbe1Q3MI99 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccbe1Q3MI99 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccbe1Q3MI99 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC12.94□□□□□ -0.34
Ccbe1Q3MI99 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccbe1Q3MI99 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccbe1Q3MI99 Gm37795-201ENSMUST00000194216 2459 ntBASIC12.94□□□□□ -0.34
Ccbe1Q3MI99 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccbe1Q3MI99 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccbe1Q3MI99 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccbe1Q3MI99 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Ccbe1Q3MI99 AC238940.1-201ENSMUST00000225106 1858 ntBASIC12.93□□□□□ -0.34
Ccbe1Q3MI99 Zkscan14-203ENSMUST00000198959 2243 ntBASIC12.93□□□□□ -0.34
Ccbe1Q3MI99 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Ccbe1Q3MI99 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Ccbe1Q3MI99 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ccbe1Q3MI99 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms