Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ebf1Q07802 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ebf1Q07802 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ebf1Q07802 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ebf1Q07802 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ebf1Q07802 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC14.51□□□□□ -0.09
Ebf1Q07802 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Ebf1Q07802 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Ebf1Q07802 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC14.51□□□□□ -0.09
Ebf1Q07802 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC14.51□□□□□ -0.09
Ebf1Q07802 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Ebf1Q07802 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
Ebf1Q07802 Gm18018-201ENSMUST00000198273 408 ntBASIC14.51□□□□□ -0.09
Ebf1Q07802 Gm6745-201ENSMUST00000199216 526 ntBASIC14.51□□□□□ -0.09
Ebf1Q07802 Gm45098-201ENSMUST00000207179 657 ntBASIC14.51□□□□□ -0.09
Ebf1Q07802 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC14.51□□□□□ -0.09
Ebf1Q07802 Dupd1-202ENSMUST00000224735 548 ntBASIC14.51□□□□□ -0.09
Ebf1Q07802 Gm6180-201ENSMUST00000065243 498 ntBASIC14.51□□□□□ -0.09
Ebf1Q07802 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ebf1Q07802 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ebf1Q07802 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
Ebf1Q07802 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Ebf1Q07802 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Ebf1Q07802 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Ebf1Q07802 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ebf1Q07802 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ebf1Q07802 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC14.51□□□□□ -0.09
Ebf1Q07802 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Ebf1Q07802 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Ebf1Q07802 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC14.51□□□□□ -0.09
Ebf1Q07802 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ebf1Q07802 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ebf1Q07802 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Ebf1Q07802 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ebf1Q07802 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ebf1Q07802 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Ebf1Q07802 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC14.5□□□□□ -0.09
Ebf1Q07802 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ebf1Q07802 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ebf1Q07802 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ebf1Q07802 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Ebf1Q07802 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ebf1Q07802 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Ebf1Q07802 Gm14042-201ENSMUST00000120139 833 ntBASIC14.5□□□□□ -0.09
Ebf1Q07802 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC14.5□□□□□ -0.09
Ebf1Q07802 Mxra8os-201ENSMUST00000097740 687 ntBASIC14.5□□□□□ -0.09
Ebf1Q07802 Gm5049-201ENSMUST00000195878 1590 ntBASIC14.5□□□□□ -0.09
Ebf1Q07802 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ebf1Q07802 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Ebf1Q07802 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ebf1Q07802 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ebf1Q07802 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ebf1Q07802 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ebf1Q07802 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ebf1Q07802 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ebf1Q07802 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ebf1Q07802 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ebf1Q07802 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Ebf1Q07802 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Ebf1Q07802 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ebf1Q07802 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ebf1Q07802 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Ebf1Q07802 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ebf1Q07802 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ebf1Q07802 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ebf1Q07802 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ebf1Q07802 Gm12620-201ENSMUST00000119791 1986 ntBASIC14.49□□□□□ -0.09
Ebf1Q07802 Gm12612-201ENSMUST00000140182 1986 ntBASIC14.49□□□□□ -0.09
Ebf1Q07802 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC14.49□□□□□ -0.09
Ebf1Q07802 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ebf1Q07802 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ebf1Q07802 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Ebf1Q07802 Gm11478-201ENSMUST00000117851 599 ntBASIC14.49□□□□□ -0.09
Ebf1Q07802 Gm13464-201ENSMUST00000119418 935 ntBASIC14.49□□□□□ -0.09
Ebf1Q07802 Gm6222-201ENSMUST00000120787 396 ntBASIC14.49□□□□□ -0.09
Ebf1Q07802 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
Ebf1Q07802 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC14.49□□□□□ -0.09
Ebf1Q07802 Gm23984-201ENSMUST00000157139 203 ntBASIC14.49□□□□□ -0.09
Ebf1Q07802 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ebf1Q07802 Gm27631-201ENSMUST00000184163 466 ntBASIC14.49□□□□□ -0.09
Ebf1Q07802 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC14.49□□□□□ -0.09
Ebf1Q07802 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Ebf1Q07802 Gm45384-201ENSMUST00000210451 277 ntBASIC14.49□□□□□ -0.09
Ebf1Q07802 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC14.49□□□□□ -0.09
Ebf1Q07802 Cdk7-205ENSMUST00000225990 1159 ntBASIC14.49□□□□□ -0.09
Ebf1Q07802 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ebf1Q07802 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Ebf1Q07802 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ebf1Q07802 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Ebf1Q07802 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC14.49□□□□□ -0.09
Ebf1Q07802 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ebf1Q07802 Gm15222-202ENSMUST00000228667 1726 ntBASIC14.49□□□□□ -0.09
Ebf1Q07802 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ebf1Q07802 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ebf1Q07802 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ebf1Q07802 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Ebf1Q07802 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Ebf1Q07802 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ebf1Q07802 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Ebf1Q07802 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 226.9 ms