Protein–RNA interactions for Protein: Q06831

Sox4, Transcription factor SOX-4, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox4Q06831 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox4Q06831 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Sox4Q06831 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Sox4Q06831 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Sox4Q06831 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC14.07□□□□□ -0.16
Sox4Q06831 Gm16476-201ENSMUST00000221544 139 ntBASIC14.07□□□□□ -0.16
Sox4Q06831 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox4Q06831 Mir125a-201ENSMUST00000083545 68 ntBASIC14.07□□□□□ -0.16
Sox4Q06831 Gm45751-201ENSMUST00000210185 1573 ntBASIC14.07□□□□□ -0.16
Sox4Q06831 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox4Q06831 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox4Q06831 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox4Q06831 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox4Q06831 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox4Q06831 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sox4Q06831 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sox4Q06831 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC14.06□□□□□ -0.16
Sox4Q06831 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Sox4Q06831 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Sox4Q06831 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sox4Q06831 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sox4Q06831 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sox4Q06831 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
Sox4Q06831 Gm13453-201ENSMUST00000118708 357 ntBASIC14.06□□□□□ -0.16
Sox4Q06831 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Sox4Q06831 Gm12134-201ENSMUST00000122109 520 ntBASIC14.06□□□□□ -0.16
Sox4Q06831 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sox4Q06831 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC14.06□□□□□ -0.16
Sox4Q06831 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sox4Q06831 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Sox4Q06831 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Sox4Q06831 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Sox4Q06831 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
Sox4Q06831 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
Sox4Q06831 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sox4Q06831 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sox4Q06831 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sox4Q06831 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Sox4Q06831 Gm37912-201ENSMUST00000191895 3076 ntBASIC14.06□□□□□ -0.16
Sox4Q06831 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Sox4Q06831 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Sox4Q06831 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC14.05□□□□□ -0.16
Sox4Q06831 BC001981-202ENSMUST00000191393 1545 ntBASIC14.05□□□□□ -0.16
Sox4Q06831 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sox4Q06831 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC14.05□□□□□ -0.16
Sox4Q06831 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sox4Q06831 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Sox4Q06831 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Sox4Q06831 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sox4Q06831 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sox4Q06831 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Sox4Q06831 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sox4Q06831 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sox4Q06831 Gm12428-201ENSMUST00000119844 727 ntBASIC14.05□□□□□ -0.16
Sox4Q06831 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Sox4Q06831 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Sox4Q06831 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Sox4Q06831 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Sox4Q06831 AA619741-201ENSMUST00000195095 646 ntBASIC14.05□□□□□ -0.16
Sox4Q06831 Gm44344-201ENSMUST00000200287 129 ntBASIC14.05□□□□□ -0.16
Sox4Q06831 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC14.05□□□□□ -0.16
Sox4Q06831 Gm20949-201ENSMUST00000206478 952 ntBASIC14.05□□□□□ -0.16
Sox4Q06831 AC102291.3-201ENSMUST00000226566 405 ntBASIC14.05□□□□□ -0.16
Sox4Q06831 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sox4Q06831 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sox4Q06831 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sox4Q06831 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Sox4Q06831 Gm44981-201ENSMUST00000205549 1943 ntBASIC14.05□□□□□ -0.16
Sox4Q06831 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Sox4Q06831 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Sox4Q06831 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Sox4Q06831 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC14.05□□□□□ -0.16
Sox4Q06831 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sox4Q06831 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sox4Q06831 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sox4Q06831 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sox4Q06831 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sox4Q06831 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sox4Q06831 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sox4Q06831 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sox4Q06831 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sox4Q06831 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Sox4Q06831 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sox4Q06831 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Sox4Q06831 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sox4Q06831 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sox4Q06831 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Sox4Q06831 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
Sox4Q06831 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Sox4Q06831 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Sox4Q06831 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sox4Q06831 Gm14767-201ENSMUST00000121559 586 ntBASIC14.04□□□□□ -0.16
Sox4Q06831 Gm12882-201ENSMUST00000121696 517 ntBASIC14.04□□□□□ -0.16
Sox4Q06831 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
Sox4Q06831 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
Sox4Q06831 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Sox4Q06831 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sox4Q06831 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sox4Q06831 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Sox4Q06831 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms