Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC13.99□□□□□ -0.17
Col9a1Q05722 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC13.99□□□□□ -0.17
Col9a1Q05722 AC102569.1-204ENSMUST00000222816 793 ntTSL 3 BASIC13.99□□□□□ -0.17
Col9a1Q05722 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col9a1Q05722 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col9a1Q05722 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Col9a1Q05722 Olfr1385-201ENSMUST00000071807 930 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Col9a1Q05722 Snora73a-201ENSMUST00000082453 205 ntBASIC13.99□□□□□ -0.17
Col9a1Q05722 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col9a1Q05722 Gm43339-201ENSMUST00000200032 1606 ntBASIC13.99□□□□□ -0.17
Col9a1Q05722 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col9a1Q05722 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col9a1Q05722 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Col9a1Q05722 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col9a1Q05722 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Col9a1Q05722 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col9a1Q05722 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col9a1Q05722 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col9a1Q05722 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col9a1Q05722 Gm42690-201ENSMUST00000197921 1836 ntBASIC13.99□□□□□ -0.17
Col9a1Q05722 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Col9a1Q05722 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Col9a1Q05722 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col9a1Q05722 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col9a1Q05722 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC13.98□□□□□ -0.17
Col9a1Q05722 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col9a1Q05722 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Col9a1Q05722 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col9a1Q05722 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col9a1Q05722 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col9a1Q05722 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col9a1Q05722 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Col9a1Q05722 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Col9a1Q05722 Gm19439-201ENSMUST00000198195 2273 ntBASIC13.98□□□□□ -0.17
Col9a1Q05722 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col9a1Q05722 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col9a1Q05722 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col9a1Q05722 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col9a1Q05722 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col9a1Q05722 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC13.98□□□□□ -0.17
Col9a1Q05722 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col9a1Q05722 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col9a1Q05722 Gm45751-201ENSMUST00000210185 1573 ntBASIC13.98□□□□□ -0.17
Col9a1Q05722 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col9a1Q05722 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Col9a1Q05722 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col9a1Q05722 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col9a1Q05722 Rfc4-202ENSMUST00000115337 416 ntTSL 5 BASIC13.98□□□□□ -0.17
Col9a1Q05722 Gm7857-201ENSMUST00000117957 358 ntBASIC13.98□□□□□ -0.17
Col9a1Q05722 Gm11675-201ENSMUST00000121873 832 ntBASIC13.98□□□□□ -0.17
Col9a1Q05722 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC13.98□□□□□ -0.17
Col9a1Q05722 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC13.98□□□□□ -0.17
Col9a1Q05722 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC13.98□□□□□ -0.17
Col9a1Q05722 Gm28041-201ENSMUST00000166080 779 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col9a1Q05722 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC13.98□□□□□ -0.17
Col9a1Q05722 Rn7s6-201ENSMUST00000175005 291 ntBASIC13.98□□□□□ -0.17
Col9a1Q05722 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col9a1Q05722 Gm37489-201ENSMUST00000191883 159 ntBASIC13.98□□□□□ -0.17
Col9a1Q05722 Nras-208ENSMUST00000200069 831 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
Col9a1Q05722 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col9a1Q05722 Acyp1-201ENSMUST00000008966 648 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col9a1Q05722 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC13.98□□□□□ -0.17
Col9a1Q05722 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col9a1Q05722 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col9a1Q05722 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Col9a1Q05722 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col9a1Q05722 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col9a1Q05722 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col9a1Q05722 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col9a1Q05722 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Col9a1Q05722 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col9a1Q05722 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col9a1Q05722 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Col9a1Q05722 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col9a1Q05722 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col9a1Q05722 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC13.97□□□□□ -0.17
Col9a1Q05722 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Col9a1Q05722 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col9a1Q05722 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col9a1Q05722 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col9a1Q05722 Gm15787-203ENSMUST00000130892 1250 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Col9a1Q05722 Cgrrf1-203ENSMUST00000133989 873 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Col9a1Q05722 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC13.97□□□□□ -0.17
Col9a1Q05722 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC13.97□□□□□ -0.17
Col9a1Q05722 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Col9a1Q05722 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC13.97□□□□□ -0.17
Col9a1Q05722 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col9a1Q05722 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col9a1Q05722 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col9a1Q05722 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC13.97□□□□□ -0.17
Col9a1Q05722 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC13.97□□□□□ -0.17
Col9a1Q05722 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col9a1Q05722 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col9a1Q05722 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col9a1Q05722 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col9a1Q05722 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col9a1Q05722 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col9a1Q05722 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col9a1Q05722 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col9a1Q05722 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms