Protein–RNA interactions for Protein: Q04683

Cxcr5, C-X-C chemokine receptor type 5, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcr5Q04683 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cxcr5Q04683 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cxcr5Q04683 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC13.63□□□□□ -0.23
Cxcr5Q04683 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
Cxcr5Q04683 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cxcr5Q04683 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cxcr5Q04683 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cxcr5Q04683 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cxcr5Q04683 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cxcr5Q04683 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cxcr5Q04683 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Cxcr5Q04683 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC13.63□□□□□ -0.23
Cxcr5Q04683 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cxcr5Q04683 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cxcr5Q04683 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cxcr5Q04683 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cxcr5Q04683 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cxcr5Q04683 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cxcr5Q04683 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC13.63□□□□□ -0.23
Cxcr5Q04683 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Cxcr5Q04683 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cxcr5Q04683 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cxcr5Q04683 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
Cxcr5Q04683 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cxcr5Q04683 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cxcr5Q04683 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cxcr5Q04683 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC13.62□□□□□ -0.23
Cxcr5Q04683 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cxcr5Q04683 Gm6159-201ENSMUST00000191249 1724 ntBASIC13.62□□□□□ -0.23
Cxcr5Q04683 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cxcr5Q04683 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cxcr5Q04683 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cxcr5Q04683 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cxcr5Q04683 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cxcr5Q04683 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC13.62□□□□□ -0.23
Cxcr5Q04683 Gm5479-201ENSMUST00000160578 435 ntBASIC13.62□□□□□ -0.23
Cxcr5Q04683 Gm5177-201ENSMUST00000183092 997 ntBASIC13.62□□□□□ -0.23
Cxcr5Q04683 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC13.62□□□□□ -0.23
Cxcr5Q04683 Gm18195-201ENSMUST00000207604 706 ntBASIC13.62□□□□□ -0.23
Cxcr5Q04683 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cxcr5Q04683 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cxcr5Q04683 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC13.62□□□□□ -0.23
Cxcr5Q04683 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC13.62□□□□□ -0.23
Cxcr5Q04683 Gm10710-201ENSMUST00000047876 3971 ntBASIC13.62□□□□□ -0.23
Cxcr5Q04683 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cxcr5Q04683 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cxcr5Q04683 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cxcr5Q04683 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cxcr5Q04683 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Cxcr5Q04683 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cxcr5Q04683 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC13.62□□□□□ -0.23
Cxcr5Q04683 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cxcr5Q04683 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Cxcr5Q04683 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cxcr5Q04683 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cxcr5Q04683 Gm42872-201ENSMUST00000200026 1967 ntBASIC13.62□□□□□ -0.23
Cxcr5Q04683 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cxcr5Q04683 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cxcr5Q04683 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cxcr5Q04683 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cxcr5Q04683 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cxcr5Q04683 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cxcr5Q04683 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cxcr5Q04683 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cxcr5Q04683 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cxcr5Q04683 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC13.61□□□□□ -0.23
Cxcr5Q04683 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Cxcr5Q04683 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cxcr5Q04683 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cxcr5Q04683 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC13.61□□□□□ -0.23
Cxcr5Q04683 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cxcr5Q04683 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
Cxcr5Q04683 Gm27301-201ENSMUST00000184012 127 ntBASIC13.61□□□□□ -0.23
Cxcr5Q04683 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC13.61□□□□□ -0.23
Cxcr5Q04683 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC13.61□□□□□ -0.23
Cxcr5Q04683 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cxcr5Q04683 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC13.61□□□□□ -0.23
Cxcr5Q04683 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cxcr5Q04683 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cxcr5Q04683 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cxcr5Q04683 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cxcr5Q04683 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cxcr5Q04683 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cxcr5Q04683 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cxcr5Q04683 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cxcr5Q04683 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
Cxcr5Q04683 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cxcr5Q04683 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Cxcr5Q04683 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cxcr5Q04683 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cxcr5Q04683 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Cxcr5Q04683 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cxcr5Q04683 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cxcr5Q04683 AC154527.4-201ENSMUST00000224364 1667 ntBASIC13.6□□□□□ -0.23
Cxcr5Q04683 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cxcr5Q04683 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cxcr5Q04683 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cxcr5Q04683 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cxcr5Q04683 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Cxcr5Q04683 Gm13410-201ENSMUST00000117058 1415 ntBASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms