Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Npas1P97459 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC12.02□□□□□ -0.48
Npas1P97459 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC12.02□□□□□ -0.48
Npas1P97459 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC12.02□□□□□ -0.48
Npas1P97459 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Npas1P97459 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Npas1P97459 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC12.02□□□□□ -0.49
Npas1P97459 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Npas1P97459 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Npas1P97459 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Npas1P97459 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Npas1P97459 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC12.02□□□□□ -0.49
Npas1P97459 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Npas1P97459 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Npas1P97459 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Npas1P97459 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Npas1P97459 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Npas1P97459 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Npas1P97459 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Npas1P97459 AC164702.1-201ENSMUST00000220135 2212 ntBASIC12.02□□□□□ -0.49
Npas1P97459 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Npas1P97459 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Npas1P97459 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Npas1P97459 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Npas1P97459 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Npas1P97459 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Npas1P97459 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Npas1P97459 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Npas1P97459 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Npas1P97459 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Npas1P97459 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
Npas1P97459 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Npas1P97459 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Npas1P97459 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Npas1P97459 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Npas1P97459 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Npas1P97459 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Npas1P97459 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Npas1P97459 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Npas1P97459 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Npas1P97459 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Npas1P97459 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC12.01□□□□□ -0.49
Npas1P97459 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC12.01□□□□□ -0.49
Npas1P97459 AC108846.1-201ENSMUST00000214531 513 ntBASIC12.01□□□□□ -0.49
Npas1P97459 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Npas1P97459 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Npas1P97459 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Npas1P97459 Mxra8os-201ENSMUST00000097740 687 ntBASIC12.01□□□□□ -0.49
Npas1P97459 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Npas1P97459 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Npas1P97459 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC12.01□□□□□ -0.49
Npas1P97459 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Npas1P97459 Gm29361-201ENSMUST00000183323 2000 ntBASIC12.01□□□□□ -0.49
Npas1P97459 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Npas1P97459 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Npas1P97459 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC12.01□□□□□ -0.49
Npas1P97459 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Npas1P97459 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Npas1P97459 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Npas1P97459 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Npas1P97459 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Npas1P97459 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Npas1P97459 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Npas1P97459 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Npas1P97459 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Npas1P97459 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
Npas1P97459 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC12□□□□□ -0.49
Npas1P97459 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Npas1P97459 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Npas1P97459 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Npas1P97459 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC12□□□□□ -0.49
Npas1P97459 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Npas1P97459 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC12□□□□□ -0.49
Npas1P97459 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC12□□□□□ -0.49
Npas1P97459 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Npas1P97459 Gm44981-201ENSMUST00000205549 1943 ntBASIC12□□□□□ -0.49
Npas1P97459 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Npas1P97459 Pck2-205ENSMUST00000226352 2784 ntBASIC12□□□□□ -0.49
Npas1P97459 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC12□□□□□ -0.49
Npas1P97459 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Npas1P97459 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC12□□□□□ -0.49
Npas1P97459 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Npas1P97459 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Npas1P97459 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Npas1P97459 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Npas1P97459 Gm7935-201ENSMUST00000100555 1278 ntBASIC12□□□□□ -0.49
Npas1P97459 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Npas1P97459 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
Npas1P97459 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Npas1P97459 Gm43767-201ENSMUST00000198933 381 ntBASIC12□□□□□ -0.49
Npas1P97459 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Npas1P97459 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Npas1P97459 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC12□□□□□ -0.49
Npas1P97459 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
Npas1P97459 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Npas1P97459 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC12□□□□□ -0.49
Npas1P97459 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Npas1P97459 Gm5639-201ENSMUST00000122305 2403 ntBASIC12□□□□□ -0.49
Npas1P97459 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC12□□□□□ -0.49
Npas1P97459 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms