Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nkx2-3P97334 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nkx2-3P97334 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Nkx2-3P97334 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Nkx2-3P97334 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nkx2-3P97334 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nkx2-3P97334 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nkx2-3P97334 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nkx2-3P97334 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nkx2-3P97334 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nkx2-3P97334 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nkx2-3P97334 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nkx2-3P97334 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nkx2-3P97334 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nkx2-3P97334 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Nkx2-3P97334 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Nkx2-3P97334 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC17.85■□□□□ 0.45
Nkx2-3P97334 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Nkx2-3P97334 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nkx2-3P97334 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nkx2-3P97334 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC17.85■□□□□ 0.45
Nkx2-3P97334 Gm8835-201ENSMUST00000173096 1169 ntBASIC17.85■□□□□ 0.45
Nkx2-3P97334 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Nkx2-3P97334 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nkx2-3P97334 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Nkx2-3P97334 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nkx2-3P97334 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC17.85■□□□□ 0.45
Nkx2-3P97334 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nkx2-3P97334 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC17.85■□□□□ 0.45
Nkx2-3P97334 AC140451.2-201ENSMUST00000228030 664 ntBASIC17.85■□□□□ 0.45
Nkx2-3P97334 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nkx2-3P97334 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nkx2-3P97334 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nkx2-3P97334 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nkx2-3P97334 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nkx2-3P97334 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nkx2-3P97334 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nkx2-3P97334 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nkx2-3P97334 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nkx2-3P97334 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nkx2-3P97334 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nkx2-3P97334 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nkx2-3P97334 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nkx2-3P97334 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Nkx2-3P97334 AC161252.3-201ENSMUST00000225465 1549 ntBASIC17.84■□□□□ 0.45
Nkx2-3P97334 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nkx2-3P97334 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nkx2-3P97334 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nkx2-3P97334 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nkx2-3P97334 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nkx2-3P97334 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nkx2-3P97334 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nkx2-3P97334 Mir692-1-201ENSMUST00000102263 109 ntBASIC17.84■□□□□ 0.45
Nkx2-3P97334 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Nkx2-3P97334 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Nkx2-3P97334 Gm12928-201ENSMUST00000117115 573 ntBASIC17.84■□□□□ 0.45
Nkx2-3P97334 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nkx2-3P97334 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nkx2-3P97334 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nkx2-3P97334 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC17.84■□□□□ 0.45
Nkx2-3P97334 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC17.84■□□□□ 0.45
Nkx2-3P97334 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Nkx2-3P97334 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Nkx2-3P97334 Mir6420-201ENSMUST00000185032 102 ntBASIC17.84■□□□□ 0.45
Nkx2-3P97334 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC17.84■□□□□ 0.45
Nkx2-3P97334 Gm5276-201ENSMUST00000196683 1047 ntBASIC17.84■□□□□ 0.45
Nkx2-3P97334 Gm4971-201ENSMUST00000205991 1108 ntBASIC17.84■□□□□ 0.45
Nkx2-3P97334 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nkx2-3P97334 Gm5425-201ENSMUST00000214125 459 ntBASIC17.84■□□□□ 0.45
Nkx2-3P97334 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Nkx2-3P97334 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nkx2-3P97334 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nkx2-3P97334 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Nkx2-3P97334 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nkx2-3P97334 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nkx2-3P97334 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nkx2-3P97334 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.84■□□□□ 0.45
Nkx2-3P97334 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nkx2-3P97334 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nkx2-3P97334 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nkx2-3P97334 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Nkx2-3P97334 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC17.84■□□□□ 0.45
Nkx2-3P97334 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nkx2-3P97334 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nkx2-3P97334 Gm9347-201ENSMUST00000211473 1607 ntBASIC17.83■□□□□ 0.45
Nkx2-3P97334 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Nkx2-3P97334 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Nkx2-3P97334 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Nkx2-3P97334 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Nkx2-3P97334 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Nkx2-3P97334 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Nkx2-3P97334 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Nkx2-3P97334 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC17.83■□□□□ 0.44
Nkx2-3P97334 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC17.83■□□□□ 0.44
Nkx2-3P97334 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Nkx2-3P97334 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Nkx2-3P97334 Gm44799-201ENSMUST00000207639 1202 ntBASIC17.83■□□□□ 0.44
Nkx2-3P97334 Gm6007-201ENSMUST00000208170 823 ntBASIC17.83■□□□□ 0.44
Nkx2-3P97334 Gm10012-201ENSMUST00000078252 192 ntBASIC17.83■□□□□ 0.44
Nkx2-3P97334 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms