Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
PrkdcP97313 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
PrkdcP97313 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
PrkdcP97313 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
PrkdcP97313 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
PrkdcP97313 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
PrkdcP97313 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
PrkdcP97313 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
PrkdcP97313 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC9.53□□□□□ -0.88
PrkdcP97313 Gm11618-201ENSMUST00000117946 267 ntBASIC9.53□□□□□ -0.88
PrkdcP97313 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
PrkdcP97313 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
PrkdcP97313 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
PrkdcP97313 Mospd4-201ENSMUST00000180618 576 ntBASIC9.53□□□□□ -0.88
PrkdcP97313 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
PrkdcP97313 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
PrkdcP97313 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
PrkdcP97313 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
PrkdcP97313 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC9.53□□□□□ -0.88
PrkdcP97313 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC9.53□□□□□ -0.88
PrkdcP97313 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC9.53□□□□□ -0.88
PrkdcP97313 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
PrkdcP97313 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
PrkdcP97313 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC9.53□□□□□ -0.88
PrkdcP97313 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC9.53□□□□□ -0.88
PrkdcP97313 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
PrkdcP97313 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
PrkdcP97313 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
PrkdcP97313 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
PrkdcP97313 Gm14350-201ENSMUST00000116642 640 ntBASIC9.53□□□□□ -0.88
PrkdcP97313 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC9.53□□□□□ -0.88
PrkdcP97313 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC9.53□□□□□ -0.88
PrkdcP97313 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC9.53□□□□□ -0.88
PrkdcP97313 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
PrkdcP97313 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
PrkdcP97313 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC9.52□□□□□ -0.88
PrkdcP97313 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC9.52□□□□□ -0.88
PrkdcP97313 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC9.52□□□□□ -0.88
PrkdcP97313 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
PrkdcP97313 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
PrkdcP97313 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
PrkdcP97313 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
PrkdcP97313 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC9.52□□□□□ -0.88
PrkdcP97313 AC121801.1-201ENSMUST00000225363 1899 ntBASIC9.52□□□□□ -0.88
PrkdcP97313 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC9.52□□□□□ -0.88
PrkdcP97313 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC9.52□□□□□ -0.88
PrkdcP97313 Tmem190-201ENSMUST00000013235 589 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
PrkdcP97313 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC9.52□□□□□ -0.88
PrkdcP97313 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC9.52□□□□□ -0.88
PrkdcP97313 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.88
PrkdcP97313 Gm42550-201ENSMUST00000201553 960 ntBASIC9.52□□□□□ -0.88
PrkdcP97313 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC9.52□□□□□ -0.88
PrkdcP97313 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC9.52□□□□□ -0.88
PrkdcP97313 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.88
PrkdcP97313 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
PrkdcP97313 Gm11839-201ENSMUST00000120647 1953 ntBASIC9.52□□□□□ -0.89
PrkdcP97313 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC9.52□□□□□ -0.89
PrkdcP97313 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
PrkdcP97313 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
PrkdcP97313 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
PrkdcP97313 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
PrkdcP97313 Gm18393-201ENSMUST00000208349 1131 ntBASIC9.52□□□□□ -0.89
PrkdcP97313 AC141438.2-201ENSMUST00000215068 271 ntBASIC9.52□□□□□ -0.89
PrkdcP97313 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC9.52□□□□□ -0.89
PrkdcP97313 AC135114.1-201ENSMUST00000228682 270 ntBASIC9.52□□□□□ -0.89
PrkdcP97313 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
PrkdcP97313 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC9.52□□□□□ -0.89
PrkdcP97313 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
PrkdcP97313 Gm19439-201ENSMUST00000198195 2273 ntBASIC9.52□□□□□ -0.89
PrkdcP97313 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC9.52□□□□□ -0.89
PrkdcP97313 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
PrkdcP97313 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC9.52□□□□□ -0.89
PrkdcP97313 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
PrkdcP97313 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC9.52□□□□□ -0.89
PrkdcP97313 4930506C21Rik-203ENSMUST00000130639 909 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
PrkdcP97313 Gm8194-201ENSMUST00000159783 859 ntBASIC9.52□□□□□ -0.89
PrkdcP97313 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
PrkdcP97313 AA914427-201ENSMUST00000193194 1166 ntBASIC9.52□□□□□ -0.89
PrkdcP97313 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC9.52□□□□□ -0.89
PrkdcP97313 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC9.52□□□□□ -0.89
PrkdcP97313 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC9.52□□□□□ -0.89
PrkdcP97313 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC9.52□□□□□ -0.89
PrkdcP97313 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
PrkdcP97313 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
PrkdcP97313 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
PrkdcP97313 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
PrkdcP97313 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC9.52□□□□□ -0.89
PrkdcP97313 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC9.52□□□□□ -0.89
PrkdcP97313 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
PrkdcP97313 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
PrkdcP97313 Gm8793-201ENSMUST00000183069 1303 ntBASIC9.51□□□□□ -0.89
PrkdcP97313 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC9.51□□□□□ -0.89
PrkdcP97313 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
PrkdcP97313 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
PrkdcP97313 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
PrkdcP97313 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC9.51□□□□□ -0.89
PrkdcP97313 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
PrkdcP97313 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
PrkdcP97313 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
PrkdcP97313 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC9.51□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 65 ms