Protein–RNA interactions for Protein: P63006

Lhx1, LIM/homeobox protein Lhx1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx1P63006 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lhx1P63006 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lhx1P63006 Gm4081-201ENSMUST00000195287 1838 ntBASIC14.04□□□□□ -0.16
Lhx1P63006 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lhx1P63006 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Lhx1P63006 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lhx1P63006 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lhx1P63006 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lhx1P63006 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC14.04□□□□□ -0.16
Lhx1P63006 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC14.04□□□□□ -0.16
Lhx1P63006 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Lhx1P63006 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC14.04□□□□□ -0.16
Lhx1P63006 Gm27437-201ENSMUST00000183429 107 ntBASIC14.04□□□□□ -0.16
Lhx1P63006 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC14.04□□□□□ -0.16
Lhx1P63006 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Lhx1P63006 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Lhx1P63006 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Lhx1P63006 Ighv8-14-201ENSMUST00000196781 358 ntBASIC14.04□□□□□ -0.16
Lhx1P63006 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lhx1P63006 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC14.04□□□□□ -0.16
Lhx1P63006 AC125206.2-201ENSMUST00000217454 574 ntBASIC14.04□□□□□ -0.16
Lhx1P63006 AC132863.2-201ENSMUST00000226643 799 ntBASIC14.04□□□□□ -0.16
Lhx1P63006 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lhx1P63006 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lhx1P63006 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lhx1P63006 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lhx1P63006 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Lhx1P63006 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Lhx1P63006 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lhx1P63006 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lhx1P63006 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC14.04□□□□□ -0.16
Lhx1P63006 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Lhx1P63006 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Lhx1P63006 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lhx1P63006 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lhx1P63006 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lhx1P63006 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lhx1P63006 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC14.04□□□□□ -0.16
Lhx1P63006 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lhx1P63006 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Lhx1P63006 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Lhx1P63006 Gm37728-201ENSMUST00000195025 2292 ntBASIC14.03□□□□□ -0.16
Lhx1P63006 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Lhx1P63006 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lhx1P63006 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Lhx1P63006 Gm12585-201ENSMUST00000117307 290 ntBASIC14.03□□□□□ -0.16
Lhx1P63006 Gm4875-201ENSMUST00000118257 786 ntBASIC14.03□□□□□ -0.16
Lhx1P63006 Gm15487-201ENSMUST00000122373 465 ntBASIC14.03□□□□□ -0.16
Lhx1P63006 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC14.03□□□□□ -0.16
Lhx1P63006 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Lhx1P63006 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lhx1P63006 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC14.03□□□□□ -0.16
Lhx1P63006 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Lhx1P63006 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lhx1P63006 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC14.03□□□□□ -0.16
Lhx1P63006 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lhx1P63006 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lhx1P63006 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lhx1P63006 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lhx1P63006 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lhx1P63006 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Lhx1P63006 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Lhx1P63006 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.16
Lhx1P63006 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Lhx1P63006 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Lhx1P63006 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Lhx1P63006 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Lhx1P63006 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Lhx1P63006 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Lhx1P63006 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC14.02□□□□□ -0.16
Lhx1P63006 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Lhx1P63006 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Lhx1P63006 Gm45667-201ENSMUST00000210380 1316 ntBASIC14.02□□□□□ -0.17
Lhx1P63006 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Lhx1P63006 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Lhx1P63006 Gm15460-201ENSMUST00000118147 391 ntBASIC14.02□□□□□ -0.17
Lhx1P63006 Gm15393-201ENSMUST00000120499 219 ntBASIC14.02□□□□□ -0.17
Lhx1P63006 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Lhx1P63006 Gm23547-201ENSMUST00000158210 271 ntBASIC14.02□□□□□ -0.17
Lhx1P63006 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC14.02□□□□□ -0.17
Lhx1P63006 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Lhx1P63006 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Lhx1P63006 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Lhx1P63006 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Lhx1P63006 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Lhx1P63006 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Lhx1P63006 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Lhx1P63006 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Lhx1P63006 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Lhx1P63006 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Lhx1P63006 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lhx1P63006 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Lhx1P63006 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lhx1P63006 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Lhx1P63006 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lhx1P63006 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lhx1P63006 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lhx1P63006 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lhx1P63006 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Lhx1P63006 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms