Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ybx1P62960 Gm9252-201ENSMUST00000172364 1602 ntBASIC14.63□□□□□ -0.07
Ybx1P62960 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Ybx1P62960 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Ybx1P62960 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Ybx1P62960 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Ybx1P62960 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Ybx1P62960 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ybx1P62960 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ybx1P62960 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Ybx1P62960 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ybx1P62960 Gm15678-201ENSMUST00000117573 960 ntBASIC14.63□□□□□ -0.07
Ybx1P62960 Gm13829-201ENSMUST00000119600 138 ntBASIC14.63□□□□□ -0.07
Ybx1P62960 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Ybx1P62960 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC14.63□□□□□ -0.07
Ybx1P62960 Gm37748-201ENSMUST00000194379 1140 ntBASIC14.63□□□□□ -0.07
Ybx1P62960 Ighv1-25-201ENSMUST00000195638 345 ntBASIC14.63□□□□□ -0.07
Ybx1P62960 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC14.63□□□□□ -0.07
Ybx1P62960 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC14.63□□□□□ -0.07
Ybx1P62960 AC139580.1-202ENSMUST00000223574 928 ntBASIC14.63□□□□□ -0.07
Ybx1P62960 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ybx1P62960 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ybx1P62960 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ybx1P62960 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ybx1P62960 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC14.63□□□□□ -0.07
Ybx1P62960 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Ybx1P62960 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Ybx1P62960 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC14.63□□□□□ -0.07
Ybx1P62960 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ybx1P62960 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ybx1P62960 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Ybx1P62960 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ybx1P62960 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Ybx1P62960 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ybx1P62960 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ybx1P62960 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ybx1P62960 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ybx1P62960 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ybx1P62960 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ybx1P62960 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Ybx1P62960 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ybx1P62960 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ybx1P62960 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ybx1P62960 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Ybx1P62960 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC14.62□□□□□ -0.07
Ybx1P62960 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ybx1P62960 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ybx1P62960 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ybx1P62960 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Ybx1P62960 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ybx1P62960 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Ybx1P62960 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ybx1P62960 AC166574.6-201ENSMUST00000227889 1806 ntBASIC14.62□□□□□ -0.07
Ybx1P62960 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ybx1P62960 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Ybx1P62960 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC14.62□□□□□ -0.07
Ybx1P62960 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ybx1P62960 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ybx1P62960 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ybx1P62960 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Ybx1P62960 Gm37912-201ENSMUST00000191895 3076 ntBASIC14.62□□□□□ -0.07
Ybx1P62960 Gm44719-201ENSMUST00000206404 149 ntBASIC14.62□□□□□ -0.07
Ybx1P62960 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ybx1P62960 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ybx1P62960 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ybx1P62960 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ybx1P62960 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ybx1P62960 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC14.62□□□□□ -0.07
Ybx1P62960 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ybx1P62960 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ybx1P62960 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ybx1P62960 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ybx1P62960 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ybx1P62960 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ybx1P62960 Gm43509-201ENSMUST00000196551 2594 ntBASIC14.62□□□□□ -0.07
Ybx1P62960 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC14.62□□□□□ -0.07
Ybx1P62960 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ybx1P62960 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Ybx1P62960 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ybx1P62960 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ybx1P62960 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ybx1P62960 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ybx1P62960 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ybx1P62960 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ybx1P62960 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Ybx1P62960 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ybx1P62960 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ybx1P62960 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ybx1P62960 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ybx1P62960 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ybx1P62960 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ybx1P62960 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ybx1P62960 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ybx1P62960 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ybx1P62960 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC14.61□□□□□ -0.07
Ybx1P62960 Gm12960-201ENSMUST00000120017 1066 ntBASIC14.61□□□□□ -0.07
Ybx1P62960 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ybx1P62960 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC14.61□□□□□ -0.07
Ybx1P62960 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC14.61□□□□□ -0.07
Ybx1P62960 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms