Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Sf3b6P59708 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Sf3b6P59708 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC12.71□□□□□ -0.38
Sf3b6P59708 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC12.71□□□□□ -0.38
Sf3b6P59708 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC12.7□□□□□ -0.38
Sf3b6P59708 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC12.7□□□□□ -0.38
Sf3b6P59708 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sf3b6P59708 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sf3b6P59708 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sf3b6P59708 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Sf3b6P59708 Best4-ps-201ENSMUST00000129783 1380 ntBASIC12.7□□□□□ -0.38
Sf3b6P59708 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Sf3b6P59708 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Sf3b6P59708 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sf3b6P59708 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC12.7□□□□□ -0.38
Sf3b6P59708 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Sf3b6P59708 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Sf3b6P59708 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sf3b6P59708 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sf3b6P59708 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Sf3b6P59708 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sf3b6P59708 Gm15173-201ENSMUST00000122049 433 ntBASIC12.7□□□□□ -0.38
Sf3b6P59708 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC12.7□□□□□ -0.38
Sf3b6P59708 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Sf3b6P59708 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC12.7□□□□□ -0.38
Sf3b6P59708 Gm2651-201ENSMUST00000203560 838 ntBASIC12.7□□□□□ -0.38
Sf3b6P59708 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sf3b6P59708 AC154262.2-201ENSMUST00000224310 2293 ntBASIC12.7□□□□□ -0.38
Sf3b6P59708 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sf3b6P59708 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sf3b6P59708 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Sf3b6P59708 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sf3b6P59708 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sf3b6P59708 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Sf3b6P59708 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Sf3b6P59708 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sf3b6P59708 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Sf3b6P59708 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sf3b6P59708 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC12.7□□□□□ -0.38
Sf3b6P59708 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sf3b6P59708 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sf3b6P59708 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sf3b6P59708 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Sf3b6P59708 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Sf3b6P59708 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sf3b6P59708 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sf3b6P59708 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sf3b6P59708 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sf3b6P59708 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sf3b6P59708 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sf3b6P59708 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sf3b6P59708 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sf3b6P59708 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sf3b6P59708 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
Sf3b6P59708 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Sf3b6P59708 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Sf3b6P59708 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sf3b6P59708 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sf3b6P59708 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sf3b6P59708 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Sf3b6P59708 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Sf3b6P59708 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sf3b6P59708 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Sf3b6P59708 Gm44771-201ENSMUST00000206975 626 ntBASIC12.69□□□□□ -0.38
Sf3b6P59708 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC12.69□□□□□ -0.38
Sf3b6P59708 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC12.69□□□□□ -0.38
Sf3b6P59708 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sf3b6P59708 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC12.69□□□□□ -0.38
Sf3b6P59708 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sf3b6P59708 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Sf3b6P59708 AC154595.3-201ENSMUST00000224579 384 ntBASIC12.69□□□□□ -0.38
Sf3b6P59708 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sf3b6P59708 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Sf3b6P59708 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sf3b6P59708 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Sf3b6P59708 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sf3b6P59708 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sf3b6P59708 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Sf3b6P59708 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sf3b6P59708 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC12.69□□□□□ -0.38
Sf3b6P59708 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sf3b6P59708 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sf3b6P59708 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sf3b6P59708 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sf3b6P59708 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sf3b6P59708 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sf3b6P59708 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sf3b6P59708 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sf3b6P59708 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Sf3b6P59708 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sf3b6P59708 Nudt18-203ENSMUST00000228768 1578 ntBASIC12.69□□□□□ -0.38
Sf3b6P59708 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sf3b6P59708 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC12.69□□□□□ -0.38
Sf3b6P59708 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sf3b6P59708 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Sf3b6P59708 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC12.68□□□□□ -0.38
Sf3b6P59708 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sf3b6P59708 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sf3b6P59708 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Sf3b6P59708 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 70.7 ms